Protein Alignment Srrm234 and prpf38b

DIOPT Version :10

• Sequence 1: NP_001097475.2
• Gene: Srrm234 / 38206
• FlyBaseID: FBgn0035253
• Length: 1655
• Species: Drosophila melanogaster
• Sequence 2: XP_002932194.1
• Gene: prpf38b / 100170167
• XenbaseID: XB-GENE-5866686
• Length: 502
• Species: Xenopus tropicalis
• Alignment Length: 317
• Identity: 61/317 - (19%)
• Similarity: 106/317 - (33%)
• Gaps: 126/317 - (39%)

  Fly    90 IMGLSKQRNDASAKPSIWVNTLFFCSLYLVAIGQGGHKPCVQAFGADQFDAEDPKEVIARGSFFN 154
            |.|||     .:::..|||:.       :.:||||.....|.....:|..|..|:.|.||
 Frog   389 IGGLS-----PNSEYEIWVSA-------VNSIGQGPPSESVVTRTGEQAPASAPRNVQAR----- 436

  Fly   155 WWFLSLSAGISISIIVVAY---VQENVNWAFGFGIPCLFMVMALAIFLLGRKIY-----RYPKGH 211
                    .:|.:.::|.:   |:.|       |:            :.|.::|     .:|.|:
 Frog   437 --------MLSATTMIVQWEEPVEPN-------GL------------IRGYRVYYTMEPEHPVGN 474

  Fly   212 HEEVN-SSNTFARIG--------RVFVIAFKNRKLRLEHSSLELDQGLLEDGQSEKRK-----DR 262
            .::.| ..:....:|        .|.|:||.:           :..|.|.|....|.:     ..
 Frog   475 WQKHNVDDSLLTTVGSLLEDETYTVRVLAFTS-----------VGDGPLSDPIQVKTQQGVPGQP 528

  Fly   263 LNFLAKA----------------------MISREGVEPCSGRDVDDAKALVRLIPIWITYVVSTI 305
            :|..|:|                      ::.|||         |..:.:.|......:|||..:
 Frog   529 MNLRAEARSETSITLSWSPPRQESIIKYELLFREG---------DHGREVGRTFDPTTSYVVEDL 584

  Fly   306 ----PYAQYITFFTKQGV-----TVDRRIL------PGVEIPAASLLSFVGVSILIS 347
                .||..:...:.||:     .|.:|.|      |..::...|:.|   .:||:|
 Frog   585 KPNTEYAFRLAARSPQGLGAFTPVVRQRTLQSKPSAPPQDVKCVSVRS---TAILVS 638

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Srrm234	NP_001097475.2	cwf21_SRRM2-like	52..100	CDD:410600	4/9 (44%)
		PTZ00121	<560..1154	CDD:173412
		U2AF_lg	747..>876	CDD:273727
		SRRM_C	<1584..1612	CDD:464573
prpf38b	XP_002932194.1	PRP38	35..215	CDD:460901
		U2AF_lg	297..>433	CDD:273727	15/55 (27%)
		SF-CC1	377..>498	CDD:273721	29/152 (19%)