DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment: Vta1 and GSC2

Sequence 1:NP_647640.1 Gene:Vta1 FlyBaseID:FBgn0035251 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_011546.3 Gene:GSC2 SGDID:S000003264 Length:1895 Species:Saccharomyces cerevisiae

Alignment Length:207 Identity:40/208 (19%)
Similarity:63/208 (30%) Gaps:72/208 (35%)


  Fly   109 NVVKAFYSSG--------VLYDILQTFGELSEEALHNRKYAKWKAAYIHNCLKNGETPIPGPLPD 165
            |:...:||:|        ..|.:.|......|..         :..|..|.|.:|..        
Yeast     7 NLNGQYYSNGDGTGDGNYPTYQVTQDQSAYDEYG---------QPIYTQNQLDDGYY-------- 54

  Fly   166 DDDEAELEGENANASADTSPEDAAGAAAPAPYQPEPD--SQPPAPSSPTT---------SGVVPP 219
            |.:|..::|.......|.|.:.       .||..:..  :|||...:|::         |...||
Yeast    55 DPNEQYVDGTQFPQGQDPSQDQ-------GPYNNDASYYNQPPNMMNPSSQDGENFSDFSSYGPP 112

  Fly   220 TAEEVLNNPNKLPSP-----PVDEEKPGGFVPY----------------VPTAQPN---PATAAT 260
            :.    ..||...:|     |..:...|...||                :..|.||   ||..|.
Yeast   113 SG----TYPNDQYTPSQMSYPDQDGSSGASTPYGNGVVNGNGQYYDPNAIEMALPNDPYPAWTAD 173

  Fly   261 IYQPIVPVAGVQ 272
            ...|: |:..::
Yeast   174 PQSPL-PIEQIE 184

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Vta1NP_647640.1 Vta1 18..148 CDD:282502 8/47 (17%)
GSC2NP_011546.3 FKS1_dom1 320..428 CDD:290986
Glucan_synthase 827..1650 CDD:280517
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C114447082
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.