DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vta1 and vta1

DIOPT Version :9

Sequence 1:NP_647640.1 Gene:Vta1 / 38204 FlyBaseID:FBgn0035251 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_001008108.1 Gene:vta1 / 493470 XenbaseID:XB-GENE-984112 Length:302 Species:Xenopus tropicalis


Alignment Length:320 Identity:142/320 - (44%)
Similarity:199/320 - (62%) Gaps:30/320 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PPCPPSLKSIQHFLKLAQEHDTRDVVIAYWARLYALQVGLKASTQTGEETKLLLGIMDWLEQMKK 68
            ||.|...:|:||.|:.||||:.||.|::|:.|||::|.|:|..:::.|..|.|..:||.||.:||
 Frog     6 PPLPAQFRSLQHHLRTAQEHEKRDPVVSYYCRLYSMQTGMKIDSKSPECRKFLSKLMDQLEALKK 70

  Fly    69 QYAENEAITNEVAAQAHIENYALKLFLYADKQDREENFGKNVVKAFYSSGVLYDILQTFGELSEE 133
            |..:.|:||.|:...||:||||||:|||||.:||...|.||:||:||::.:|.|.|..||||:||
 Frog    71 QLGDCESITQEIVGSAHVENYALKMFLYADNEDRAGRFNKNMVKSFYTASLLLDTLAVFGELTEE 135

  Fly   134 ALHNRKYAKWKAAYIHNCLKNGETPIPGPLPDDDDEAELEGENANASADTSPEDAAGAAAPAPYQ 198
            .:.:||||:|||.||||||||||||..||:..:.:|.:.|.|...:|:.::.|      :|:.||
 Frog   136 NIQHRKYARWKATYIHNCLKNGETPQAGPIGMEGEEYDEENEGEGSSSFSNRE------SPSAYQ 194

  Fly   199 PEPDSQPPAPSSPTTSGV-VPPTAEEVLNNPNKLP------SPPVDEEKPGGFVPYVPTAQPNPA 256
            |     |..| :|..:|: :||.|....|.|.::|      |..:....|..    :|...|:..
 Frog   195 P-----PNIP-TPNYTGIQIPPGAHAPANTPAEVPHSTGVASNAIAHPSPQN----IPAVDPSLY 249

  Fly   257 TAATIYQPIVPVAGVQITPDQMITAQKYCKYAGSALNYDDVKTAIENLQKALKLLSTGSE 316
            .|.|       ....::||:....|||:||||||||.|:||.||::|||||||||:||.|
 Frog   250 NAKT-------QGDARLTPEDFARAQKFCKYAGSALQYEDVNTAVQNLQKALKLLTTGRE 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vta1NP_647640.1 Vta1 18..148 CDD:398366 66/129 (51%)
Vta1_C 275..311 CDD:407932 24/35 (69%)
vta1NP_001008108.1 Vta1 20..150 CDD:309683 66/129 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 170 1.000 Domainoid score I3719
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H6473
Inparanoid 1 1.050 267 1.000 Inparanoid score I2960
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1450538at2759
OrthoFinder 1 1.000 - - FOG0006035
OrthoInspector 1 1.000 - - oto103393
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4945
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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