DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vta1 and vta1

DIOPT Version :10

Sequence 1:NP_647640.1 Gene:Vta1 / 38204 FlyBaseID:FBgn0035251 Length:316 Species:Drosophila melanogaster
Sequence 2:XP_005160712.1 Gene:vta1 / 406414 ZFINID:ZDB-GENE-040426-2154 Length:303 Species:Danio rerio


Alignment Length:320 Identity:159/320 - (49%)
Similarity:210/320 - (65%) Gaps:30/320 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PPSLKSIQHFLKLAQEHDTRDVVIAYWARLYALQVGLKASTQTGEETKLLLGIMDWLEQMKKQYA 71
            ||.||:|||:|:.||||:.||.|:||:.||||:|.|:|..::|.|..|.|:.:||.||.|||:..
Zfish     4 PPQLKAIQHYLRTAQEHEKRDPVVAYYCRLYAMQTGMKLDSKTPECRKFLVKLMDQLEMMKKELG 68

  Fly    72 ENEAITNEVAAQAHIENYALKLFLYADKQDREENFGKNVVKAFYSSGVLYDILQTFGELSEEALH 136
            :||:|:.|:...|||||||||:|||||.:||.|.|.||::|:||:|.:|:|:|..|||||||.|.
Zfish    69 DNESISQEIVGNAHIENYALKMFLYADNEDRSERFHKNMIKSFYTSSLLFDVLSVFGELSEENLQ 133

  Fly   137 NRKYAKWKAAYIHNCLKNGETPIPGPLPDD----DDEAELEGENANASADTSPEDAAGAAAPAPY 197
            .|||||||||||||||||||||.|||:..:    |||...||...:.:.|..|.     :.|: :
Zfish   134 QRKYAKWKAAYIHNCLKNGETPQPGPIGMEGEAYDDEFGAEGGGPSQAPDNPPH-----SQPS-F 192

  Fly   198 QPEPDSQPPAPSSPTTSGVVPPTAEEVLNNPNKLPSP----PVDEEKPGGFVPYVPTAQP--NPA 256
            :..|..||  |:|..::..:||.:....|.|.::|.|    ||   ||   || ||...|  :|:
Zfish   193 RGHPSDQP--PTSNFSNIQIPPGSHAPANTPAEIPHPEAAQPV---KP---VP-VPRTMPVVDPS 248

  Fly   257 TAATIYQPIVPVAGVQITPDQMITAQKYCKYAGSALNYDDVKTAIENLQKALKLLSTGSE 316
            ......:     ..|::||:....||||||||||||.|:||.||::|||||||||:||.|
Zfish   249 LLNNTQE-----GDVRLTPEDFTRAQKYCKYAGSALQYEDVGTAVQNLQKALKLLTTGKE 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vta1NP_647640.1 Vta1 18..148 CDD:461380 75/129 (58%)
Vta1_C 275..311 CDD:465647 25/35 (71%)
vta1XP_005160712.1 Vta1 15..145 CDD:461380 75/129 (58%)
SAV_2336_NTERM 140..>240 CDD:469044 45/114 (39%)
Vta1_C 262..299 CDD:465647 26/36 (72%)

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