DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13917 and rhobtb3

DIOPT Version :9

Sequence 1:NP_001189017.1 Gene:CG13917 / 38186 FlyBaseID:FBgn0035237 Length:2019 Species:Drosophila melanogaster
Sequence 2:XP_691270.6 Gene:rhobtb3 / 562804 ZFINID:ZDB-GENE-091204-190 Length:619 Species:Danio rerio


Alignment Length:687 Identity:128/687 - (18%)
Similarity:217/687 - (31%) Gaps:258/687 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   773 GNDCKRSI----SLTANGATDSGAGLMSIIDKLPIISKASSLSID-SSVSPYDDFSGSNPGISSC 832
            |::|...:    ..|::|....|. |.|.:..       .:..:| :|::|      |...::..
Zfish     9 GSECPGGVGPGDETTSSGQIQGGL-LWSYLGH-------GARELDPNSMTP------SRHPLNPA 59

  Fly   833 SEEEQGQVQGRIKKRRRDVQINETYDKSSLASVTEGILSKDLSPASNTDTDDLTFQQ-------- 889
            ..|.|.:|.|.::...||....:..| |...||...:...|:.....:..|.|.|||        
Zfish    60 FMEYQSRVMGDVRVMVRDCPSWDILD-SDWVSVRSILEQADIVVIKYSVNDKLAFQQVRNGYAPR 123

  Fly   890 ----------------------DE-----------------------QLAKEQAELVSVPLQLTS 909
                                  ||                       ||::   :|.:..|:|.|
Zfish   124 LRPLLRHWGVPVILVAVGARLNDEGPPCTCPLCASDWSSCVPHSEGLQLSR---DLGATYLELPS 185

  Fly   910 SSN-----RTSSVMETII------EAKETASPKKQVTLSNGHTMESLHATIEKQKQLLETVNEHG 963
            .:|     ...||:|..:      :|||  .|.|:    .||.:                 ||..
Zfish   186 LNNFFVGRYFGSVLEYFMIQCLKQKAKE--RPDKR----RGHRL-----------------NEPR 227

  Fly   964 EQTTQQPSQIP------SSFVKLSDMDKPVKHDLQSPD------SMSKSVGNNH----------- 1005
            .....||:::|      |||.:  |:...::..:|..|      ...|.:|..|           
Zfish   228 PPHLDQPARLPPVRVEESSFSQ--DLQWLLERGVQFADVAFYAGESGKELGWAHASVLCAVSPYF 290

  Fly  1006 RSSQLGQRLY---------RDENRARPHSWAMTRSTGNTLQNFTNSVDNI--------RSLSRL- 1052
            |...:|::.:         ||  |..|||         .|..:...||::        ..|||| 
Zfish   291 RQLLVGRQAWERPVSRCTCRD--RDGPHS---------LLSTWDGGVDDLPRADGHPPGHLSRLV 344

  Fly  1053 -----------------------FPNFSKEFSNSLPNGMTLEQVQGQQVDYIQTDLSADSSLASS 1094
                                   :....:..:..|.|.|.:.|:..:...::..: .|.....:.
Zfish   345 VKDPLLCLCLWETLMFLYRGAWEWEYLEEAIAEKLKNPMAVAQLMDRMRSFVGRE-KAPRDTPTP 408

  Fly  1095 FSRSGMDESSLSCRQPRRLGEDLLKMFLQEIATDMLVEVHGRRIRAHKCILRSRCQYFAAMLAGH 1159
            .|:.|          |..||    .:|...:.:|::..|.|..:.||:.:|.:||...|||.:|.
Zfish   409 RSQQG----------PMTLG----SLFNSPLYSDVIFMVQGSVLPAHRAVLVARCDVMAAMFSGK 459

  Fly  1160 GSQS---VVSLQGYSYAAVHFALCHIYSGASHPPDGISLMELAALADLLGLEGLKEVTAHALKTN 1221
            .:::   ||.:.|.|.......|.::|:....|...:..|.:...|::..::.|:.:        
Zfish   460 YAEARSRVVPIHGVSSDTFLAFLEYLYTDTCCPASVLQAMAILVCAEMYQVKRLQHL-------- 516

  Fly  1222 YCHNFHKPCSGCSDGILQVLPV----------------ALNHALDDLYRKCLRWTCRHYLKV--- 1267
                    |..|....||.:|.                |..|..|.||...|.:...:||..   
Zfish   517 --------CEVCVCAYLQSMPSRELASTGISVIRLLRRAKCHNADQLYVWLLHFIANNYLIFSHK 573

  Fly  1268 ------------------WPTRQFAQLPPDILGRCRQ 1286
                              ||:|.:.|...:...|.||
Zfish   574 PDFLELSDEEREQVERLRWPSRGYLQELSEYQQRRRQ 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13917NP_001189017.1 BTB 1117..>1185 CDD:279045 19/70 (27%)
BTB 1128..>1191 CDD:197585 19/65 (29%)
BACK 1238..>1281 CDD:197943 15/79 (19%)
rhobtb3XP_691270.6 P-loop_NTPase <97..189 CDD:304359 14/94 (15%)
BTB 254..>296 CDD:295341 6/41 (15%)
BTB 417..518 CDD:279045 25/120 (21%)
BTB 428..518 CDD:197585 22/105 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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