Sequence 1: | NP_647626.1 | Gene: | CG7879 / 38184 | FlyBaseID: | FBgn0035235 | Length: | 985 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002934460.2 | Gene: | rbm12b.3 / 100491658 | XenbaseID: | XB-GENE-22063331 | Length: | 659 | Species: | Xenopus tropicalis |
Alignment Length: | 1027 | Identity: | 206/1027 - (20%) |
---|---|---|---|
Similarity: | 330/1027 - (32%) | Gaps: | 412/1027 - (40%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSVIIRLQNLPWTANARDIRNFFSGLSIPEGGVHIIGGEMGDAFIAFSTDEDARCAMLKDREKLM 65
Fly 66 EIQVRLLLSSRAEMQKVIETARKAASAQAPVSVPVPMPVVVPVTAAKVAGPAAPLPPIIGGLNTF 130
Fly 131 LGQGQVKGVATGTVPSFLTYQQQAGITLSDVTGRRSRSRSSSSDDSDRERERDRQRERERGRKRR 195
Fly 196 SDRLDKSQERELKMVAGGGALPSPWAQPPQNQLPAVGLGLNMGLNLNLPQIPSLQSYTTSTTTTN 260
Fly 261 VTNNYNLEPSATSVQLLTALQQVSSGSAAPAQPSKSESEPIAFASVNPYAQMYPQLFQQQQMLLQ 325
Fly 326 QQQTQAKVSPTMGGSPGGGSTPQVVADTCYIRMSGMCQNTSYSDIRKYFQGMYIP--HNGIKIMM 388
Fly 389 VNGSRTGVAYVEFSRVSSAQKAVQRNNTMFRDRLIQI--------VPVGDDEFEMAEE-RASRQ- 443
Fly 444 -------GQDGSRSHGNHNGGDRGERGGGAPVPVPRPVTNVLYIEDLPQTTTEQDIMKMFSASYT 501
Fly 502 VVD----ILLSPSPKNRRESVAFVLFAREAEADSALQDTSKHYIGFRQLRVRSSSEEDMQNAKEK 562
Fly 563 QRRANEQLLKEEADQREELLKDQQRRQKQQQQENENIQANRFAADPRRRQAEDQQQQQQMNMGPN 627
Fly 628 FNSNMSPNMMAPFVNGGNMPFHMPPLQQNGVNNFPFNMNNN---YNYNGNSNGNGPNYPNDNGGA 689
Fly 690 GVIQRPRQEDVFVRVHNCEYATRANDLGE---LFSLEHLRIEHIEQLFNERNQSSGEFIV-EFSD 750
Fly 751 PASCKL-AIREFHNRR--FRGRGLRVVAITPQ----EIADRMKKPFMDYLPGGNGPRKAETNNAN 808
Fly 809 DGAGGNKASAQPSRRRGPSRFDKPQEQPSQQQDRPLSLEREDNSSTS--SNAPVKQHFNPFARPD 871
Fly 872 PPLSSSSLSPSNQGQVKPTSPVPVPTSIIPDKFNRP---GCVVAMRNVPFKAELKDIMRFFSDYK 933
Fly 934 LSPDDIIRRFNDEGKPTGDTRVAFESPSEARSAFESRRKKQIFNRTVYLDII 985 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG7879 | NP_647626.1 | RRM1_RBM12_like | 2..75 | CDD:240954 | 40/72 (56%) |
RRM_hnRNPH_ESRPs_RBM12_like | 355..425 | CDD:240700 | 23/71 (32%) | ||
RRM | <364..551 | CDD:223796 | 51/209 (24%) | ||
RRM_SF | 478..549 | CDD:240668 | 17/74 (23%) | ||
RRM_SF | 702..773 | CDD:240668 | 19/77 (25%) | ||
RRM_hnRNPH_ESRPs_RBM12_like | 910..982 | CDD:240700 | 20/71 (28%) | ||
rbm12b.3 | XP_002934460.2 | RRM1_RBM12B | 2..80 | CDD:410139 | 44/77 (57%) |
RRM_SF | 158..240 | CDD:418427 | 23/84 (27%) | ||
RRM_SF | 285..365 | CDD:418427 | 18/83 (22%) | ||
RRM_SF | 399..474 | CDD:418427 | 22/106 (21%) | ||
RRM_SF | 585..657 | CDD:418427 | 20/75 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D132643at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R11245 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.040 |