DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG12099 and Rnf170

Sequence 1:NP_647623.1 Gene:CG12099 FlyBaseID:FBgn0035232 Length:708 Species:Drosophila melanogaster
Sequence 2:XP_006509280.1 Gene:Rnf170 MGIID:1924983 Length:286 Species:Mus musculus

Alignment Length:57 Identity:19/58 (33%)
Similarity:25/58 (43%) Gaps:15/58 (26%)


  Fly   209 ELQCPICLYPPVAAKLTRCGHAYCWPCLLHYLSLSDKTWR--------KCPICYDAI 257
            |:.|||||:.......|.|||.:|..|::.|       ||        .||||...:
Mouse   112 EMYCPICLHQASFPVETNCGHLFCGSCIIAY-------WRYGSWLGAISCPICRQTV 161

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG12099NP_647623.1 zf-C3HC4_2 212..253 CDD:290634 17/49 (35%)
Rnf170XP_006509280.1 RING-HC_RNF170 115..158 CDD:319467 18/50 (36%)
RING-HC finger (C3HC4-type) 115..157 CDD:319467 17/49 (35%)
DUF1232 232..265 CDD:311019
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG2164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 avgDist Average_Evolutionary_Distance R1987
TreeFam 00.000 Not matched by this tool.
21.930

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