DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12099 and rnf10

DIOPT Version :10

Sequence 1:NP_647623.1 Gene:CG12099 / 38181 FlyBaseID:FBgn0035232 Length:708 Species:Drosophila melanogaster
Sequence 2:NP_596530.1 Gene:rnf10 / 2541365 PomBaseID:SPBP8B7.23 Length:673 Species:Schizosaccharomyces pombe


Alignment Length:771 Identity:178/771 - (23%)
Similarity:320/771 - (41%) Gaps:181/771 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSNNSSNSKKQPQSSHHGKSSS--AESQRKSSELHTNSNKQRHSRRRNQVPTPRNDQQQQPQQP 63
            |.||::|:||...:|.:...|||  ..|..|:.|...:....|:|.::.|....:|.|....::.
pombe    12 MPSNSNSSSKLNAKSPNFIPSSSNIPRSSAKTKEHSADRKPHRNSEKKTQGMPRKNQQLASSERK 76

  Fly    64 AKLRPNVDKRPKARGFGGGYDFPSPRGQDGASGSSRLAYSATGYSRSGDFDHELNSVYTQGSKKQ 128
            .|.:..::|:..|.....|.....|:               |.|      |..|..:.:..:.|:
pombe    77 TKNKKRLEKQSSAIADSIGESLDDPQ---------------TVY------DEHLFDILSARTNKR 120

  Fly   129 ---NLNHLLNFHCVPR----------ELERGH--HHQAQQHHGLSGRKQRYNKEQFLQANFQFVI 178
               ||||||||...||          ...||:  :.|...||.:       :|.:::.||::||:
pombe   121 GQINLNHLLNFQFTPRTNSNAFSAPPRRSRGYNTYGQGSGHHPM-------DKSRYVNANYRFVV 178

  Fly   179 RS-GAKAQVNGSPDALIDWSYIEQINIQTTEEL-QCPICL-YPPVAAKLTRCGHAYCWPCLLHYL 240
            .. |........||:.:.|..:.|:...:..:| .||.|| ..||||:::||||.||:.|||.::
pombe   179 SPIGDYQSQKLDPDSPVKWEDVWQVLCSSDFQLAACPFCLEEKPVAARMSRCGHVYCFSCLLRFV 243

  Fly   241 SLSDKT----------------WRKCPICYDAIHAGD---LKSCTIEQLRDLQVGEKITFQLMRR 286
            ......                .|.||||:|:|...|   ::....::.:.|:.|:.:..:|.:|
pombe   244 ETPTAAEVKAAETSGTKIVKCGHRSCPICWDSIRLRDVHPIRWVEDKEFQKLEEGKSVCLRLYQR 308

  Fly   287 RKGSMYIENHVAGLGETIERFP-------------------FVSAGEEAKRYSKFLIAKR--MDV 330
            ..||             |..||                   |..:|   ..|::.:|...  |..
pombe   309 NNGS-------------ILAFPRSCRSFALDGSFHSDEIPNFTMSG---AAYARIIIGSHDYMVQ 357

  Fly   331 AAIIERERNELLAESDVSC--PEDVFIQQALVMLQERVEKL--GVEKPDPKEDEEETAPVLCLET 391
            ..::|.|:.:.:|..|:|.  ..|.:.::...:|.:|:..|  .|.:.:.|..:.: ...|||::
pombe   358 QHLLEIEQLQQIAAEDISLYGSADTYYERITQILLDRISSLSESVNEQNIKSLQTD-IDNLCLQS 421

  Fly   392 ETKIDIEKSDDAS-ISSGEASSSLSYSSNHNKYYYFYQSNDGQNIYLHPLNVKMLQACYGTLDLG 455
            .:...:.:.||.: :|..|.:.:          |.|||.....:|||.||::::|::.:|:.:..
pombe   422 NSLKQLSEVDDLNDVSGSEIADA----------YLFYQPFAHSHIYLSPLDIRILKSAFGSYENF 476

  Fly   456 PLLIEAQIVQMEQ-HSMDEEHRRKFTCLGHLPLTCQFSVVEVELQPPVVTGGILKLFKEDILHRK 519
            |..:..::.::.. |.::.|.|::|..:.|||..|:.:.:|.:.. .::...:|..||.:|..|:
pombe   477 PDELVPRVERISSGHLVNSELRQRFKYMAHLPEGCEVAFIECDWS-KIIPKEVLLTFKSEISKRR 540

  Fly   520 KERQRRD-REERKREQHINEINDRQMGKLIASAANLDLSSSHEFPTCGFEEALPAPSGSVPMNIS 583
            |:|:.:: ||||.|::     .:|...:.|.|..|:                    ...||..:.
pombe   541 KQRKAQEMREERYRQR-----AERDTEEQIYSELNM--------------------QRPVPKTVV 580

  Fly   584 NQDPGSRYSSVTLGSPKQ-EMWPTIGSNSPGGGGAPLDVQVGAWGRSAPPPPRAVMVPRTSDEDF 647
            ::||...:.  ||||..| |....:.::.     :.|......||..|       :....:|.| 
pombe   581 HEDPAEAFP--TLGSHHQFESTDEVNTDE-----STLSTAKTVWGTRA-------LANIQNDTD- 630

  Fly   648 EQRSVGHWGLGELLVGALDQKKQKVGAAKSNGAAPAESKKQKKAKGKKMVPLFATG 703
            :|..:..|.:....|..|              :||:::.|.||   ||.:.|.:||
pombe   631 DQDDLDGWKVDWDKVAQL--------------SAPSKNSKNKK---KKKLVLLSTG 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12099NP_647623.1 RING-HC_RNF10 211..263 CDD:438198 25/71 (35%)
rnf10NP_596530.1 RING_Ubox 214..282 CDD:473075 25/67 (37%)

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