DRSC/TRiP Functional Genomics Resources

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Protein Alignment Psf1 and LOC1271127

DIOPT Version :10

Sequence 1:NP_612086.1 Gene:Psf1 / 38136 FlyBaseID:FBgn0035194 Length:202 Species:Drosophila melanogaster
Sequence 2:XP_061516113.1 Gene:LOC1271127 / 1271127 VectorBaseID:AGAMI1_013624 Length:207 Species:Anopheles gambiae


Alignment Length:176 Identity:88/176 - (50%)
Similarity:120/176 - (68%) Gaps:10/176 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 VRQVLEEIKAIFEENVAQAS--------SYNASGDRSLWPLLNFRHAALQRNKRCLLAYLYERCR 90
            :|:.|.....:|..::|...        ::|.:|||.|.||:.:||..::|.|||:||||..|..
Mosquito    33 MRKNLLHGSTLFSSSLANTRFPLAPNRITFNETGDRKLLPLVMYRHNLIKRQKRCVLAYLSNRLF 97

  Fly    91 RIKALRWEFGPIIPGDIKQALCEPEVTFFNNYSKSLAAYMCSAGYNQGLPIDLTNNLRPPKSLYI 155
            |:|.|||..|||:|.:||..:.:||..:||.||:.||.||  |..:.|..::|||:::|||||||
Mosquito    98 RLKRLRWHVGPILPPEIKSCINDPESAWFNKYSRILAEYM--ASIHDGYGLNLTNDIKPPKSLYI 160

  Fly   156 EVRCMEDYGKFELDDGEVIHLKKNSQHYLPRAQVESLVRQGILHHI 201
            ||||:.|||||||:.||::.||||||||||:.|.|.|:|||||.||
Mosquito   161 EVRCLTDYGKFELESGEIVLLKKNSQHYLPKLQCEQLIRQGILQHI 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Psf1NP_612086.1 GINS_A_psf1 9..134 CDD:212548 43/107 (40%)
GINS_B_Psf1 153..201 CDD:412032 34/47 (72%)
LOC1271127XP_061516113.1 None

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