DRSC/TRiP Functional Genomics Resources

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Protein Alignment bab1 and bab2

DIOPT Version :10

Sequence 1:NP_728565.1 Gene:bab1 / 38116 FlyBaseID:FBgn0004870 Length:977 Species:Drosophila melanogaster
Sequence 2:NP_523879.2 Gene:bab2 / 44254 FlyBaseID:FBgn0025525 Length:1067 Species:Drosophila melanogaster


Alignment Length:1011 Identity:381/1011 - (37%)
Similarity:476/1011 - (47%) Gaps:301/1011 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 RSSPTQQEEKRIKSEDRTSPTGGAKDEDKESQGHAVAGGGGSSPVSSPQGRSSSVASPSSSSQQF 102
            ||||.   |.:||:...|.|                           |:.:   :..||...|||
  Fly   167 RSSPV---ETKIKTNPETKP---------------------------PRRK---IVPPSGEGQQF 198

  Fly   103 CLRWNNYQTNLTTIFDQLLQNECFVDVTLACDGRSMKAHKMVLSACSPYFQTLLAETPCQHPIVI 167
            ||||||||:|||.:||:|||:|.||||||:|:|.|:|||||||||||||||.|..:.||||||:|
  Fly   199 CLRWNNYQSNLTNVFDELLQSESFVDVTLSCEGHSIKAHKMVLSACSPYFQALFYDNPCQHPIII 263

  Fly   168 MRDVNWSDLKAIVEFMYRGEINVSQDQIGPLLRIAEMLKVRGLADVTHMEAATAAAAAASSERMP 232
            ||||:||||||:|||||:|||||.||||.|||::||.||:||||:|      :|......:..:|
  Fly   264 MRDVSWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAEV------SAGRGEGGASALP 322

  Fly   233 SSPKESTSTSRTEHDREREAEELLAFMQPEKKLRTSDWDPAELRLSPLERQQGRNVRKRRWPSAD 297
            .|..:       :.|.|.|.....|.:|.:     .|.||.|            .::.:|     
  Fly   323 MSAFD-------DEDEEEELASATAILQQD-----GDADPDE------------EMKAKR----- 358

  Fly   298 TIFNPPAPPSPLSSLIAAERMELEQKERERQRDCSLMTPPPK--------PPMSSGSTVGATRRL 354
                |...|..:        ::|.|::|:|.||.|..||.|.        ....|..|.|.::..
  Fly   359 ----PRLLPEGV--------LDLNQRQRKRSRDGSYATPSPSLQGGESEISERGSSGTPGQSQSQ 411

  Fly   355 ETAI-HALDMPSPAATPGPLSRSSRPHSQSPQQQQAQQQGQLPLPLPLHPHHHASPAP----HPS 414
            ..|: .:..:.:|.|:|.|.:...|..:.:....|.:                 ||||    |.:
  Fly   412 PLAMTTSTIVRNPFASPNPQTLEGRNSAMNAVANQRK-----------------SPAPTATGHSN 459

  Fly   415 QTAGSAHHPASPAGDSRFPLGPAAAMAAARELSGLGPGPSAEPRLPPPPP--HHH---------- 467
            ..:|:|.|  ||.|      |.|...|....::.:         :||||.  |||          
  Fly   460 GNSGAAMH--SPPG------GVAVQSALPPHMAAI---------VPPPPSAMHHHAQQLAAQHQL 507

  Fly   468 ---------------GGGGVGGGGVGG----------GGAGGVGSGGGSSLA---DDLEIKPGIA 504
                           |.|..|.||.|.          ||.|..|||.|:::.   ||:||||.||
  Fly   508 AHSHAMASALAAAAAGAGAAGAGGAGSGSGSGASAPTGGTGVAGSGAGAAVGSHHDDMEIKPEIA 572

  Fly   505 EMIREEERAKMMEN-SH-AWMG----ATG-STLAADSYQYQLQSMWQKCWNTN-QNLMHHMRFRE 561
            |||||||||||:|: .| .|||    ||| :::|||||||||||||||||||| |||:..:||||
  Fly   573 EMIREEERAKMIESGGHGGWMGAAAAATGAASVAADSYQYQLQSMWQKCWNTNQQNLVQQLRFRE 637

  Fly   562 RGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKG 626
            ||||||||||.|||||||||||||||||||||:|||||||||||||||||||||:|||.|.|||.
  Fly   638 RGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKFDIPYPTFVLYANRVHNMLGPSLDGGADPRPKA 702

  Fly   627 RGRPQRILLGIWPDEHIKGVIKTVVFRDTKDIKDESLAAHMPPYGRHSPAFPLQDLPLSYPGASG 691
            ||||||||||:||:|.|:.|||.|||||.::|| |.::||.  |.                    
  Fly   703 RGRPQRILLGMWPEELIRSVIKAVVFRDYREIK-EDMSAHQ--YA-------------------- 744

  Fly   692 ALAGAPSSMACPNGSGPQTGVGVAGEQHMSQETAAAVAAVAHNIRQQMQMAAVPPGLFNLPPHPG 756
                        ||.|..|.:| .|.......:|||....|.|       ||:.|        |.
  Fly   745 ------------NGQGHGTYIG-GGTTTNGYHSAAAAKLAAQN-------AALAP--------PD 781

  Fly   757 VGGGVGNVPGAAGGRASISPALSSGSGPRHAPSPCGPAGLLPNLPPSMAVALHHQ---QQQQAAH 818
            .|                              ||..          ||...|..|   ||||...
  Fly   782 AG------------------------------SPLS----------SMTETLRRQILSQQQQHQQ 806

  Fly   819 HHMQQLHLQQQQAHLHHHQQQQQQQQQQHHQGGHQVAHKSGFGASSSSSASSSSMGQHHAPKAKS 883
            ||.||.|.|||.:   |||||....|..:.........:|......|::|:.::....|..:...
  Fly   807 HHQQQAHHQQQPS---HHQQQSPHAQSMNMYKSPAYLQRSEIEDQVSAAAAVAAAAAKHQQQQGE 868

  Fly   884 SPLRSETPRLHSPLGDLGL---------------------DMASYKREFS------PSRLFAEDL 921
            .......|.| |.||.:||                     ..|||.||.|      ..|....:|
  Fly   869 RRGSENLPDL-SALGLMGLPGLNVMPSRGSGGGSGGAAPNSAASYARELSRERERDREREREREL 932

  Fly   922 AELVGA-SVSSSSSSAAAATAPPERSAGAASAATGA 956
            :...|: |..|||.|.:|.:....:..||||..:.|
  Fly   933 SRQYGSQSRGSSSGSGSAKSLTASQRPGAASPYSAA 968

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bab1NP_728565.1 BTB_POZ_BAB-like 126..209 CDD:349624 63/82 (77%)
HTH_psq 569..614 CDD:283007 42/44 (95%)
bab2NP_523879.2 BTB_POZ_BAB-like 222..305 CDD:349624 63/82 (77%)
HTH_psq 645..690 CDD:283007 42/44 (95%)

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