DRSC/TRiP Functional Genomics Resources

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Protein Alignment bab1 and LOC1278674

DIOPT Version :10

Sequence 1:NP_728565.1 Gene:bab1 / 38116 FlyBaseID:FBgn0004870 Length:977 Species:Drosophila melanogaster
Sequence 2:XP_318279.5 Gene:LOC1278674 / 1278674 VectorBaseID:AGAMI1_010802 Length:499 Species:Anopheles gambiae


Alignment Length:591 Identity:141/591 - (23%)
Similarity:229/591 - (38%) Gaps:190/591 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 QQFCLRWNNYQTNLTTIFDQLLQNECFVDVTLACDGRSMKAHKMVLSACSPYFQTLLAETPCQHP 164
            |||.||||||.:.:...||.|...|.||||||.|:||.::|||::||||||||:.:..|.|||||
Mosquito     4 QQFSLRWNNYTSYIAGAFDSLRYEEDFVDVTLCCEGRKIRAHKILLSACSPYFKDVFKENPCQHP 68

  Fly   165 IVIMRDVNWSDLKAIVEFMYRGEINVSQDQIGPLLRIAEMLKVRGLADVTHMEAATAAAAAASSE 229
            ::|.::|.::||.::|||||:||::|.|:|:...|..||:|.:|||.|.|            |..
Mosquito    69 VIIFKNVRYTDLMSLVEFMYQGEVSVPQEQLPSFLHTAEILAIRGLTDNT------------SDS 121

  Fly   230 RMPSSPKESTSTSRTEHDREREAEELL---AFMQPEKKLRTSDWDPAELRLSPLERQQGRNVRKR 291
            |.|:    ||:||..       |::|:   |.::....:.|:|    .|.|:             
Mosquito   122 RQPA----STTTSAI-------AQQLIQSQAVLEKPATITTTD----SLYLT------------- 158

  Fly   292 RWPSADTIFNPPAPPSPLSSLIAAERMELEQKERERQRDCSLMTPP--PKPPMSSGSTVGATRRL 354
             .||..||.:.|       .|:.|:                :.|.|  .||.:.:..|       
Mosquito   159 -LPSNSTIVHQP-------KLVQAQ----------------IQTTPIITKPLIKNTPT------- 192

  Fly   355 ETAIHALDMPSPAATPG---PLSRSSRP---------HSQSPQQQQAQQQGQLPLPLPLHPHHHA 407
                   :|||.||:..   |:::..:|         .|||.|.||.|.|.|.......|....|
Mosquito   193 -------EMPSLAASSTLAVPIAQQQQPAIAKIQVQASSQSQQPQQVQVQVQQVQQTQTHQTQQA 250

  Fly   408 SPAPHPSQT--------------------------AGSAHHPASPAGDSRFPLGPAAAMAAAREL 446
            :.:...||:                          ..|..:.:.|:|.:..........:...|:
Mosquito   251 TASQTQSQSQQATTLQEVVENVVLPRKKKVKGQQIIASQSNTSIPSGSTVTVTTTTTGQSGDNEM 315

  Fly   447 -------------------------SGLGPGPSAEPRLPPPPPHHHGGGGVGGGGVGGGGAGGVG 486
                                     ||...|.:.:..:|.              .:..|.....|
Mosquito   316 YETDTYTITTKDAREDHEQAEQYVESGQSSGTTLKMEIPE--------------FISVGEPINTG 366

  Fly   487 SGGGSS--------LADDLEIKPGIAEMIRE--EERAKMMENSHAWMGATGSTLAADSYQ-YQLQ 540
            :|..::        :::::|.|....:|.::  |.....::.|..:.|:|.....::..| .:|:
Mosquito   367 NGTNNTYLQESYELVSENMEDKDEEEDMAQDNIEIEGSEVDMSRLFQGSTDEQTKSNILQDTELR 431

  Fly   541 SMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYA 605
            .....||   :...|.|.......|.|.:           .|..:.|...:|.||:.     ::.
Mosquito   432 FRCSICW---KGFKHPMSLTLHKDLHSGK-----------TKCPVCLRSFSRSYDMR-----IHL 477

  Fly   606 NRVHNM 611
            |::|.:
Mosquito   478 NKIHQV 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bab1NP_728565.1 BTB_POZ_BAB-like 126..209 CDD:349624 44/82 (54%)
HTH_psq 569..614 CDD:283007 7/43 (16%)
LOC1278674XP_318279.5 None

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