DRSC/TRiP Functional Genomics Resources

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Protein Alignment bab1 and zbtb20

DIOPT Version :10

Sequence 1:NP_728565.1 Gene:bab1 / 38116 FlyBaseID:FBgn0004870 Length:977 Species:Drosophila melanogaster
Sequence 2:XP_017946862.1 Gene:zbtb20 / 100302397 XenbaseID:XB-GENE-993556 Length:751 Species:Xenopus tropicalis


Alignment Length:919 Identity:165/919 - (17%)
Similarity:271/919 - (29%) Gaps:334/919 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 NNYQTNLTTIFDQLLQNECFVDVTLACDGRSMKAHKMVLSACSPYFQ--TLLAETPCQHPIVIMR 169
            :|:..::....::......|.|||:...|..::||:.||:|.||:||  .||..:..:.|.|   
 Frog    11 HNFSNSVLETLNEQRNRGHFCDVTVRIHGSMLRAHRCVLAAGSPFFQDKLLLGYSDIEIPSV--- 72

  Fly   170 DVNWSDLKAIVEFMYRGEINVSQDQIGPLLRIAEMLKVRGLAD-----VTHMEAATAAAAAASSE 229
             |:...::.:::|||.|.:.|||.:...:|..|.:|:::.:.|     |:............|::
 Frog    73 -VSVHAVQKLIDFMYSGVLRVSQSEALQILTAASILQIKTVIDECTRIVSQNVGGVYPLLPDSAQ 136

  Fly   230 RMPSSPKESTSTSRTEHDREREAEELLAFMQPEKKLRTSDWDPAELRLSPLERQQGRNVRKRRWP 294
            ..|....|| .||....|.|                                   ...::..|..
 Frog   137 ETPRGTPES-GTSGQSSDTE-----------------------------------SNYLQSHRQH 165

  Fly   295 SADTIFNPPAPPSPLSSLIAAERMELEQKERERQRDCSLMTPPPKPPMSSGSTVGATRRLETAIH 359
            |.|.|:         |:|..                ||:.....:....||:.|...:.      
 Frog   166 SVDRIY---------SALYT----------------CSMHNGSGERSFYSGALVSHHKT------ 199

  Fly   360 ALDMPSPAATPGPLSRSSRPHSQSPQ-----QQQAQQQGQLPLPLPLHPHHHASPAPHPSQTAGS 419
            ||.:|            .:.|.:.|.     .|::|:..:.....|...|....|.|...||...
 Frog   200 ALGLP------------RQHHMEEPSWITRIHQRSQRMERYLSATPETTHCRKQPRPVRIQTLMG 252

  Fly   420 AHHPASPAGDSRFPLGPAAAMAAAR-------ELSGLGPGPSAEPRLPPPPPHHHGGGGVGGGGV 477
            ..|......|.....|..::.|..|       |.:....|..:||:               |...
 Frog   253 NIHIKQEVEDDYDYYGQQSSQALERNESEECTEDTDQAEGTESEPK---------------GESF 302

  Fly   478 GGGGAGGVGSGGGSSLADDLEI--KPGIAEMIREEERAKMMENSHAWMGATGSTLAADSYQYQLQ 540
            ..|.:..:|:...|.....:.|  :.|..|..:.|......|.|.                    
 Frog   303 DSGVSSSIGTEPDSGEQQYMPILSREGPQEPSQAESNNLPTEGSE-------------------- 347

  Fly   541 SMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYA 605
                     ||:..|                             |..|.::.:.::...:.||  
 Frog   348 ---------NQDQPH-----------------------------LETSSSSPERNLDTDSTVL-- 372

  Fly   606 NRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDTKDIKDESLAAHMPP- 669
             ||.|    |.|                          |||::|.|        .:|:|..||. 
 Frog   373 -RVSN----STD--------------------------KGVVQTSV--------TQSIAQTMPNT 398

  Fly   670 --YGRHSPAFPLQ-DLPLSYPGASGALAGAPSSMACPN-------GSGPQTGVGVAGEQHMSQET 724
              |.|.:...... .:||:.. ::..:.|...:...|.       ||||:               
 Frog   399 QLYLRQTETLTSNLRMPLTLT-SNTQVIGTAGNTYLPTLFTTQAAGSGPK--------------- 447

  Fly   725 AAAVAAVAHNIRQQMQMAAVPPGLFNLPPH-PG--------VGGGVGNVPGAAGGRASISPALSS 780
                                 |.||:||.. ||        ...|:....|.....:..|.:.||
 Frog   448 ---------------------PFLFSLPQSIPGQQTQFVTVPQSGISPFAGQYQNTSQTSHSTSS 491

  Fly   781 GSGPRHAPSPCGPAGLLPNLPPSMAVALHHQQQQQAAHHHMQQLHLQQQQAHLHHHQQQQQQQ-- 843
            ..|.: .|..|    .|.|            :...|..::::         |:..|..::..|  
 Frog   492 AQGEK-KPYEC----TLCN------------KTFTAKQNYVK---------HMFVHTGEKPHQCS 530

  Fly   844 ------QQQHHQGGHQVAHKSGFGASSSSSAS-----SSSMGQHHAPKAKSSPLRSETPRLHSPL 897
                  ..:.:...|.|.| :|..|...|..:     .||:..|              .|||.  
 Frog   531 ICWRSFSLKDYLIKHMVTH-TGVRAYQCSICNKRFTQKSSLNVH--------------MRLHR-- 578

  Fly   898 GDLGLDMASYKREFSPSRLFAEDLAELVGASVSSSSSSAAAATAPPERSAGAASAATGADAPSSS 962
            |:...:....|::||...|....:|.   .|.::.::|.....|||.......||.....||.|.
 Frog   579 GEKSYECYICKKKFSHKTLLERHVAL---HSATNGTASLPITAAPPGSVPAPGSAQPLGSAPISG 640

  Fly   963 SSGGIKVEP 971
            ::.|..:.|
 Frog   641 TTPGQGLPP 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bab1NP_728565.1 BTB_POZ_BAB-like 126..209 CDD:349624 29/84 (35%)
HTH_psq 569..614 CDD:283007 7/44 (16%)
zbtb20XP_017946862.1 BTB_POZ_ZBTB20_DPZF 6..122 CDD:349517 32/114 (28%)
zf-C2H2 499..521 CDD:395048 5/46 (11%)
C2H2 Zn finger 501..521 CDD:275368 5/44 (11%)
SUF4-like 529..>578 CDD:411020 11/63 (17%)
C2H2 Zn finger 529..550 CDD:411020 3/21 (14%)
C2H2 Zn finger 529..549 CDD:275368 2/19 (11%)
zf-C2H2 555..577 CDD:395048 5/35 (14%)
C2H2 Zn finger 557..577 CDD:411020 5/33 (15%)
C2H2 Zn finger 557..577 CDD:275368 5/33 (15%)
zf-H2C2_2 569..594 CDD:463886 8/40 (20%)
C2H2 Zn finger 585..605 CDD:275368 5/22 (23%)
PRK14959 <606..>691 CDD:184923 12/44 (27%)

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