Protein Alignment Usp10 and Nelf-A

DIOPT Version :10

• Sequence 1: NP_728554.1
• Gene: Usp10 / 38103
• FlyBaseID: FBgn0052479
• Length: 1517
• Species: Drosophila melanogaster
• Sequence 2: NP_001262804.1
• Gene: Nelf-A / 42520
• FlyBaseID: FBgn0038872
• Length: 1264
• Species: Drosophila melanogaster
• Alignment Length: 1172
• Identity: 245/1172 - (20%)
• Similarity: 336/1172 - (28%)
• Gaps: 512/1172 - (43%)

  Fly     6 SSASTTAGSSGAAGGGAA-TPISTPSTPQPSGVSSGPGNNGNNNNNHHNNTLVSPSGNNNLMTPV 69
            :.|::|:.:.|..|..|. |.:.||.||:    |:...||.||||            |||
  Fly   383 AQATSTSVADGQPGKPAVETKLKTPRTPK----SAAKLNNNNNNN------------NNN----- 426

  Fly    70 QAFTPTGQPVYNPPVYMSAHGGHPHAGAHYPAMIPAPMPSNHVYVNNVTANVNLHGWPHGVPAYM 134
             :|..|.:.:.......|..           .::||.:....:..:..|..|::...|
  Fly   427 -SFNHTPKRIKQEIEIKSEE-----------IIVPASIKLEKIETSPSTQRVSIQQQP------- 472

  Fly   135 PPGGQHHYIGHGDMPQEQGNTVMPHLQPVPINLAPQGGSPNPHGPRMGGGRMRERGRPRGGGPRR 199
                          |.....|  |||.   |..:||              :.:..|.....|...
  Fly   473 --------------PSLVQRT--PHLL---IRSSPQ--------------KRQNNGATTSAGTTT 504

  Fly   200 NDYHGPRHLQQQQLITLPPQQQLPPPDGANPGLQ-------LQPDQIGQQLAPPEAHMQHLQQYY 257
            ... |...::.::|...|    :....|.:|...       |.|.|: :|.|.|.|::
  Fly   505 TTV-GNTTIKMEKLDIKP----MIRATGVSPSTSAGTTTTLLTPQQL-RQAANPLANL------- 556

  Fly   258 AAPPTYAYGPYPSPYFTPQHANVQ---PPPNATAAQQATGTPLFISGPLMYNPAWFNHGGYIYPM 319
                             |.:.:|:   ....|.||..||.:
  Fly   557 -----------------PNNISVKITSAKAKAAAAAAATSS------------------------ 580

  Fly   320 MHPAEYQYVPEDAGQPGVDERGAQPDGGMTQIWHQGPMYAEDFEALQQQQQQQQVAVHPNGGAVS 384
                                      |..||  .|.|      :.||.||..||  .||
  Fly   581 --------------------------GSQTQ--SQQP------QTLQVQQAPQQ--SHP------ 603

  Fly   385 VADELNHNSS-----------------SLPSSETSSMISPNYPIYDPQMHEMQHQMGVMQIFDDG 432
               .|..|||                 :||||.||:..:...|
  Fly   604 ---PLLINSSTPVILASSPSAQRAKALALPSSSTSATTTTTIP---------------------- 643

  Fly   433 QMAALQPIHPGAGPLPQYEDELAECGAPPPGPIPVAWTAAMPLPPDAVQPALLPPPPHHILQQTS 497
             ..|::.:     ||.|.:.      |...||:                          |:.||
  Fly   644 -SQAIKTM-----PLSQLKT------ATNSGPV--------------------------IISQT- 669

  Fly   498 PLLIEQPAQLVQAQP-PQPPTPTPQQQQQQQHQEQTADKSLTQNNNEVVALDEKLANEKQQQIDF 561
               |.|||:..|.|. ........|||||||.|:|..                      .|||..
  Fly   670 ---IIQPAKRAQQQAGTSSAAAASQQQQQQQSQQQLL----------------------HQQIQQ 709

  Fly   562 HQQQQEQQQQQQQQQQQQQLHPLAQQQQQEEQQQPQQLQPL--------------------QTEK 606
            ..|||.|..||.||||.|.:....|||.|:.|||.||.||:                    |...
  Fly   710 QTQQQAQLPQQPQQQQTQYILATPQQQPQQIQQQQQQQQPILPTLTSFSHSRPMPQTTTLYQATT 774

  Fly   607 P------PTKVPNLVVATVAPQLQQPPLQQHQQQQ--------------TSPVVVSPKQQ----- 646
            |      |||:  |:..:.:..:...||:|.|.||              ||..||||.|.
  Fly   775 PSGSGQTPTKI--LLKTSGSSSVVMTPLRQAQPQQATAVVSSNPPPLVATSAAVVSPGQTTLNIQ 837

  Fly   647 -----------QQQSQAAHQNSYHDQHPLPQQQQPQQQQPQPQRKPSQQYNQAQQQQVRRKYSSE 700
                       |..||||.|     ||   .|.|.|||||.||..........||.::
  Fly   838 NVQLPNRPVTIQPASQAAQQ-----QH---MQAQLQQQQPHPQHTIVANTTATQQPKL------- 887

  Fly   701 YNHHHHQHGSSDTGIQTTKTMSWTNSAQHKKSTQSVSVTASPN---------------------- 743
                      |...:|.|..:..:.     .|..:||.|:..|
  Fly   888 ----------SQVLMQPTAAVGTSG-----VSALNVSPTSGKNKTIILTQKGVILRNIGGDMYQQ 937

  Fly   744 ----SVNNGPGVG-------AAGKANYSHTTKTFTNQQHYQQ-----------------QHYHTQ 780
                :|.|..|:|       .||..:...||.:...|...||                 ||...|
  Fly   938 IPISNVGNMQGLGGTTLMTTTAGPPSLVKTTPSSGVQLQQQQSGKQILPTLIPTSSLGGQHVIVQ 1002

  Fly   781 NSYNNNSSGGGSSSNSSSSSSNNQPQVRNY--GTMKMPSSPVAWTAPTPERKNSQQAAAAP---- 839
            .....|..|      :|...:..:|.:.|.  |...:|........| .::....|..|||
  Fly  1003 QQQPTNVIG------NSQQQTIIRPVMTNVGGGLTTLPQGLTLIQRP-GQQPQLVQVQAAPGSTQ 1060

  Fly   840 --------AAATAS----------------AAPVAITTVTTSTAS----ITATPNQFQPETGSSS 876
                    .||.||                .||.....:.|||.|    ....||...|.|
  Fly  1061 RTIITQSNTAAAASQQQPRQQQQQILVQHKPAPTLQQRLVTSTTSGGQGQQGNPNAGLPRT---- 1121

  Fly   877 ASPAVAAAQQQQPAAQQHAQAAQTGAAAAPSKSHSNYASSKKHQSYEPVVLSSVVATSSSA---- 937
            ....|.|.|||||   |..||.|..:..||.:...:.::...|:::|....::.|:....|
  Fly  1122 VQVQVQAQQQQQP---QQQQATQQQSQQAPQRRGLSLSNEHVHKAHEMFRKANRVSRPDKALILG 1183

  Fly   938 -------NPQPQLNLAPPAPPASQNSSDSSQLSWASLFASNKPVAKVAPYEASKIAQQQPSHPVL 995
                   ||:|                            :|:.|..:...|..:..||...|..|
  Fly  1184 FMAGLRENPRP----------------------------NNENVLVIKLGETEEKVQQDNGHTAL 1220

  Fly   996 QL 997
            .|
  Fly  1221 CL 1222

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usp10	NP_728554.1	UCH	1110..1479	CDD:425685
Nelf-A	NP_001262804.1	None