DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dci and ECHIA

DIOPT Version :10

Sequence 1:NP_612065.1 Gene:Dci / 38100 FlyBaseID:FBgn0035169 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_193356.2 Gene:ECHIA / 827314 AraportID:AT4G16210 Length:265 Species:Arabidopsis thaliana


Alignment Length:272 Identity:71/272 - (26%)
Similarity:121/272 - (44%) Gaps:22/272 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QGYKELLVE---QQGKLLVAKFNNPKKKNCINRVAYQEMTRVLTEVNDDEGVTIVVFTGVGDIFT 65
            |...|.|::   :.|.:.|...|.||..|.:.|....::.:...:::.||.|.:|:|||.|..|.
plant     3 QTVSENLIQVKKESGGIAVITINRPKSLNSLTRAMMVDLAKAFKDMDSDESVQVVIFTGSGRSFC 67

  Fly    66 SGNDLSQSSNTDDIDAFFKQSNATFKAMVLSFVNCRKIVLALVNGPAIGIGATIVGLCDVAWCSE 130
            ||.||:.:.:....|....:::.     |:.....||.::..:||.||..|..:...||:...|.
plant    68 SGVDLTAAESVFKGDVKDPETDP-----VVQMERLRKPIIGAINGFAITAGFELALACDILVASR 127

  Fly   131 TTYFYTPFTKLGLVPEGGSSYMLPLILGRSKASEILLLSEPLSAQEAYQFNFVSRIFKASELESV 195
            ...|.....:.|:.|..|.|..|..|:|.:||.|:.|.|.||:|..|.:..||:.:.:..|    
plant   128 GAKFMDTHARFGIFPSWGLSQKLSRIIGANKAREVSLTSMPLTADVAGKLGFVNHVVEEGE---- 188

  Fly   196 IWPKLRQYSEL----PTNSLLQGKRLVKDGFLENLIKANEAECKQL------LQQFQHPEFAQAI 250
            ...|.|:.:|.    ....:|:.|.::.||...:|..|...|.::.      :.:.|..:..:.|
plant   189 ALKKAREIAEAIIKNEQGMVLRIKSVINDGLKLDLGHALTLEKERAHAYYSGMTKEQFRKMQEFI 253

  Fly   251 IDFASRKNKAKL 262
            ....|:|..:||
plant   254 AGRGSKKPSSKL 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DciNP_612065.1 CaiD 9..258 CDD:440647 66/261 (25%)
ECHIANP_193356.2 PLN02888 1..262 CDD:215480 69/267 (26%)

Return to query results.
Submit another query.