DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dci and eci1

DIOPT Version :10

Sequence 1:NP_612065.1 Gene:Dci / 38100 FlyBaseID:FBgn0035169 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001292513.1 Gene:eci1 / 334101 ZFINID:ZDB-GENE-030131-6033 Length:301 Species:Danio rerio


Alignment Length:273 Identity:46/273 - (16%)
Similarity:98/273 - (35%) Gaps:52/273 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TYQGYKELLVEQQGKLLVAKFNNPKKKNC-----INRVAYQEMTRVLTEVNDDEGVTIVVFTGV- 60
            |:.|:..||          ..|:...::|     :::..|...:::..:::...||.::.|... 
Zfish    11 THPGFLSLL----------SGNSSHGRSCALRYLVSKNDYSTSSKIKVDLDSSNGVAVLQFQSPP 65

  Fly    61 --------------------------GDIFTSGNDLSQSSNTDDIDAFFKQSN--ATFKAMV--- 94
                                      |.|.||......|:..|.::.:.|...  |.|...|   
Zfish    66 VNSLSLDFLTEFAINLEKLELDRSCRGVIITSAQPKVFSAGLDILEMYQKSPEHCAEFWKAVQEA 130

  Fly    95 -LSFVNCRKIVLALVNGPAIGIGATIVGLCDVAWCSETTYFYTPF--TKLGLV-PEGGSSYMLPL 155
             |......|:.:|.:||.:...|..:...||....::...:....  |:||:| |......||. 
Zfish   131 WLKLYGSSKVTIAAINGNSPAGGCLLAMCCDYRIMADNPRYSIGLNETQLGIVAPFWFKDTMLN- 194

  Fly   156 ILGRSKASEILLLSEPLSAQEAYQFNFVSRIFKASELESVIWPKLRQYSELPTNSLLQGKRLVKD 220
            ::|..:..:.|.|....:...|.:...|..:....::.|.....:.::..:|.::....|.:::.
Zfish   195 VVGHRETEKGLQLGLLYNTPNALKIGLVDELVPEDKVLSTAAETMTKWLAIPDHARQISKSMMRK 259

  Fly   221 GFLENLIKANEAE 233
            ..::.|:...||:
Zfish   260 PTVDKLLANREAD 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DciNP_612065.1 CaiD 9..258 CDD:440647 44/266 (17%)
eci1NP_001292513.1 crotonase-like 53..292 CDD:474030 39/221 (18%)

Return to query results.
Submit another query.