DRSC/TRiP Functional Genomics Resources

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Protein Alignment JMJD5 and AT5G19840

DIOPT Version :10

Sequence 1:NP_612063.2 Gene:JMJD5 / 38097 FlyBaseID:FBgn0035166 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_001190341.1 Gene:AT5G19840 / 832104 AraportID:AT5G19840 Length:549 Species:Arabidopsis thaliana


Alignment Length:300 Identity:74/300 - (24%)
Similarity:121/300 - (40%) Gaps:77/300 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 SNCDIPQL----DAPSLEEFQTKCFEAGQPTLLLNTIQHWPALHKW----LDLNYLLQVAG---- 211
            :.|:.|.:    :|.:..:|::.......|.:.......|.|..||    ..|:||.:.||    
plant     3 TGCEFPMIKTFENALTAADFESTVELTNFPAVFRGCASVWDAYSKWNPFNSGLDYLEERAGSVEV 67

  Fly   212 ----NRTVPIEIGSNYASDEWSQQLVKI--RDFLSRQFGKEPSKA---GQNIE------------ 255
                :||.|:     :..|..|.:.|.:  .||:  :|.|:..:.   |..::            
plant    68 EAMLSRTAPV-----FNGDIRSHERVSLPFSDFI--RFCKQHMRGKGNGSGVDAKSADLNPMCED 125

  Fly   256 ------YLAQHELF-------AQIPALKEDISIPDYCTISNEDTPGAVDIKAWLGPAGTVSPMHY 307
                  ||||..:.       ..:..|::||..|.:.     |......|..|:..|...|..||
plant   126 YRPGQIYLAQFPILNDEKEEKVLLKILRQDIQTPTFL-----DAKSLSSINFWMNSAEARSSTHY 185

  Fly   308 DPKHNLLCQVFGSKRIILAAPADTDNLYP---------HDSEFLANTARIDAAQLDPETYPLV-- 361
            ||.|||||.|.|.|:::|..|:.:.:|||         |.|..|.|....|        ||..  
plant   186 DPHHNLLCVVSGRKKVVLWPPSASPSLYPMPIYGEASNHSSVGLENPNLSD--------YPRAEH 242

  Fly   362 AKVKFYQLLLQPGDCLYMPPKWWHYVRSEAPSFSVSFWWE 401
            :..:..::.|..||.:::|..|:|.|.|:..:.:|:|||:
plant   243 SLKQSQEITLNAGDAVFIPEGWFHQVDSDELTVAVNFWWQ 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JMJD5NP_612063.2 Cupin_8 172..401 CDD:463936 70/281 (25%)
AT5G19840NP_001190341.1 Cupin_8 19..285 CDD:463936 71/283 (25%)

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