Protein Alignment Vti1a and VTI1

DIOPT Version :10

• Sequence 1: NP_612053.1
• Gene: Vti1a / 38085
• FlyBaseID: FBgn0260862
• Length: 230
• Species: Drosophila melanogaster
• Sequence 2: NP_013924.1
• Gene: VTI1 / 855237
• SGDID: S000004810
• Length: 217
• Species: Saccharomyces cerevisiae
• Alignment Length: 232
• Identity: 66/232 - (28%)
• Similarity: 118/232 - (50%)
• Gaps: 31/232 - (13%)

  Fly     2 SLLEQYEQQYATLIAEITAHIGRLQQQNNNSERHDLCSKIDSSLPEAQELLEQMGLEVREL--NP 64
            |||..||..:.|.:.:..|.:.....| ..|:|:.....::....|..:||:||.:||...  :.
Yeast     3 SLLISYESDFKTTLEQAKASLAEAPSQ-PLSQRNTTLKHVEQQQDELFDLLDQMDVEVNNSIGDA 66

  Fly    65 GLRSSFNGKL----QVAQAELKR-LQAEYRLTKDKQRSQANTFTTLDLGDS---YEDV---SIST 118
            ..|:::..||    :..|:::|| ||                 :.:|.||.   :.|:   :|..
Yeast    67 SERATYKAKLREWKKTIQSDIKRPLQ-----------------SLVDSGDRDRLFGDLNASNIDD 114

  Fly   119 DQRQRLLDNSERIERTGNRLTEGYRVALETEQLGAQVLNDLHHQRETLQGARARLRETNAELGRA 183
            ||||:||.|...::::|:||.:..|:|.|||.:|:|::.||..|||||:.||..|.:.::.:.::
Yeast   115 DQRQQLLSNHAILQKSGDRLKDASRIANETEGIGSQIMMDLRSQRETLENARQTLFQADSYVDKS 179

  Fly   184 SRTLNTMMLRALREKVVLYGVGVCFVVAVGVSLYLTF 220
            .:||.||..|.:..|.:.|.:....::.:.:.|:..|
Yeast   180 IKTLKTMTRRLVANKFISYAIIAVLILLILLVLFSKF 216

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vti1a	NP_612053.1	V-SNARE	11..89	CDD:461516	20/84 (24%)
		SNARE_Vti1a	128..189	CDD:277244	22/60 (37%)
VTI1	NP_013924.1	V-SNARE	12..92	CDD:461516	18/80 (23%)
		SNARE_Vti1	127..185	CDD:277215	22/57 (39%)