Protein Alignment: Vti1a and Vti1a

• Sequence 1: NP_612053.1
• Gene: Vti1a
• FlyBaseID: FBgn0260862
• Length: 230
• Species: Drosophila melanogaster
• Sequence 2: NP_075589.1
• Gene: Vti1a
• RGDID: 621490
• Length: 217
• Species: Rattus norvegicus
• Alignment Length: 220
• Identity: 83/221 (38%)
• Similarity: 140/221 (63%)
• Gaps: 17/221 (8%)

  Fly     5 EQYEQQYATLIAEITAHIGRLQQQNNNSERHDLCSKIDSSLPEAQELLEQMGLEVRELNPGLRSS 69
            |.|||.:|.|.||||:.|.|:.:...: |:..:.:.::..|.||:||||||.|||||:.|..|..
  Rat     6 EGYEQDFAVLTAEITSKISRVPRLPPD-EKKQMVANVEKQLEEARELLEQMDLEVREIPPQSRGM 69

  Fly    70 FNGKLQVAQAELKRLQAEYRLTK----DKQRSQANTFTTLDLGDSYEDVSISTDQRQRLLDNSER 130
            ::.:::..:.|:.:|:.:::.::    |:.|::.       |||:...   |.:||..||||:||
  Rat    70 YSNRMRSYKQEMGKLETDFKRSRIAYSDEVRNEL-------LGDAGNS---SENQRAHLLDNTER 124

  Fly   131 IERTGNRLTEGYRVALETEQLGAQVLNDLHHQRETLQGARARLRETNAELGRASRTLNTMMLRAL 195
            :||:..||..||::|:||||:|.::|.:|.|.||.:|.||.|||||:|.||::||.|..|:.|.:
  Rat   125 LERSSRRLEAGYQIAVETEQIGQEMLENLSHDRERIQRARERLRETDANLGKSSRILTGMLRRII 189

  Fly   196 REKVVLYGVGVCFVVAVGVSLYLTF 220
            :.:::|..:|:  :|.:.:...:||
  Rat   190 QNRILLVILGI--IVVITILTAITF 212

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vti1a	NP_612053.1	V-SNARE	11..89	CDD:282816	27/78 (35%)
		SNARE_Vti1a	128..189	CDD:277244	33/61 (54%)
Vti1a	NP_075589.1	V-SNARE	12..90	CDD:282816	27/78 (35%)
		SNARE_Vti1a	122..183	CDD:277244	35/61 (57%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930				C42479916
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000
Homologene	1	1.000				H39963
Inparanoid	1	1.050	150	1.000	Inparanoid score	I4223
OMA	1	1.010
OrthoDB	1	1.010				D1195966at2759
OrthoFinder	1	1.000				FOG0003559
OrthoInspector	1	1.000				T1088935
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100			LDO	PTHR21230
Phylome	1	0.910		0.667	Consistency score
TreeFam	0	0.000	Not matched by this tool.
	10	10.010