Protein Alignment Vti1a and Vti1a

DIOPT Version :10

• Sequence 1: NP_612053.1
• Gene: Vti1a / 38085
• FlyBaseID: FBgn0260862
• Length: 230
• Species: Drosophila melanogaster
• Sequence 2: XP_038945994.1
• Gene: Vti1a / 65277
• RGDID: 621490
• Length: 229
• Species: Rattus norvegicus
• Alignment Length: 222
• Identity: 80/222 - (36%)
• Similarity: 138/222 - (62%)
• Gaps: 9/222 - (4%)

  Fly     5 EQYEQQYATLIAEITAHIGRLQQQNNNSERHDLCSKIDSSLPEAQELLEQMGLEVRELNPGLRSS 69
            |.|||.:|.|.||||:.|.|:.:...: |:..:.:.::..|.||:||||||.|||||:.|..|..
  Rat     6 EGYEQDFAVLTAEITSKISRVPRLPPD-EKKQMVANVEKQLEEARELLEQMDLEVREIPPQSRGM 69

  Fly    70 FNGKLQVAQAELKRLQAEYRLTKDKQRSQANTFTTLDLGDSYEDVSIS-TDQRQRLLDNSERIER 133
            ::.:::..:.|:.:|:.:::.::.....:.......|.|:|.|:..|. .::|..||||:||:||
  Rat    70 YSNRMRSYKQEMGKLETDFKRSRIAYSDEVRNELLGDAGNSSENQLIKLREERAHLLDNTERLER 134

  Fly   134 TGNRLTEGYRVALET-----EQLGAQVLNDLHHQRETLQGARARLRETNAELGRASRTLNTMMLR 193
            :..||..||::|:||     :|:|.::|.:|.|.||.:|.||.|||||:|.||::||.|..|:.|
  Rat   135 SSRRLEAGYQIAVETGKNSEKQIGQEMLENLSHDRERIQRARERLRETDANLGKSSRILTGMLRR 199

  Fly   194 ALREKVVLYGVGVCFVVAVGVSLYLTF 220
            .::.:::|..:|:  :|.:.:...:||
  Rat   200 IIQNRILLVILGI--IVVITILTAITF 224

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vti1a	NP_612053.1	V-SNARE	11..89	CDD:461516	27/77 (35%)
		SNARE_Vti1a	128..189	CDD:277244	32/65 (49%)
Vti1a	XP_038945994.1	V-SNARE	12..90	CDD:461516	27/77 (35%)
		SNARE_Vti1a	129..195	CDD:277244	33/70 (47%)