DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rev1 and eso1

DIOPT Version :10

Sequence 1:NP_612047.1 Gene:Rev1 / 38079 FlyBaseID:FBgn0035150 Length:995 Species:Drosophila melanogaster
Sequence 2:NP_596778.1 Gene:eso1 / 2539666 PomBaseID:SPBC16A3.11 Length:872 Species:Schizosaccharomyces pombe


Alignment Length:910 Identity:165/910 - (18%)
Similarity:303/910 - (33%) Gaps:336/910 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 KHGTQGFPKRETLKSLANSHHNCLERYVMHIDMDCFFVSVGLRTRPELRGLPIAVTHSKGGNAAT 312
            |.|||..|.                |.|.|||.|.|:..|                         
pombe    18 KAGTQNSPL----------------RVVAHIDQDAFYAQV------------------------- 41

  Fly   313 DVPVHPQADRKAELELFAQRFEHHFHDGDKAEKVRSGFDKKMSLS-----EIASCSYEAREKGIR 372
                                           |.||.|.|..:.|:     .:.:.:|.||...|.
pombe    42 -------------------------------ESVRLGLDHSVPLAVQQWQGLIAVNYAARAANIS 75

  Fly   373 NGMFVGQALKLCPELKTI----------------------------PYDFEGYKEVAFTLYDTVA 409
            ....|.:|.|.||||.|.                            ||..|..|     :.:.:.
pombe    76 RHETVTEAKKKCPELCTAHVKTWKAGESEAKYHENPNPNYYKTCLDPYRHESVK-----ILNIIK 135

  Fly   410 QYTLNIEAVSCDEMFVELT-DL--------------AHELNV----------------------- 436
            ::...::..|.||.|:||| |:              :.:.||                       
pombe   136 KHAPVVKKASIDECFIELTSDVKRIVLEEYPYLKIPSEDSNVALPQAPVLLWPAEFGMVIEEEVV 200

  Fly   437 ------------DVMAF-----VSHLRQEVYSKTGCPCSAGVAGNKLLARMATKEAKPNGQFLLD 484
                        ||..|     |..:|.::|.:....|||||:.|.:|:::.:...|||.|.:| 
pombe   201 DRTKEDYERDWDDVFLFYAAKIVKEIRDDIYLQLKYTCSAGVSFNPMLSKLVSSRNKPNKQTIL- 264

  Fly   485 SSNDILAYMAPMSLDLLPGVGSSISHK-LKQAGLNNCGDVQNTTLEKMEKVLGKKLGQNLFQNCR 548
            :.|.|..|:..:.:..:..:|.....: :...|.::..||.|.:::.:...||:..|..::..|.
pombe   265 TKNAIQDYLVSLKITDIRMLGGKFGEEIINLLGTDSIKDVWNMSMDFLIDKLGQTNGPLVWNLCH 329

  Fly   549 GIDDRPLAYE-QIRKTVSAEMNFGIRFTNSVE-CEQFLCQLSEEVTKRLVEIR--RKARSINLKI 609
            |||:..:..: ||:..:||: ||..:...|.| ...:....:.::..|.:|:.  |:.::|.|.:
pombe   330 GIDNTEITTQVQIKSMLSAK-NFSQQKVKSEEDAINWFQVFASDLRSRFLELEGMRRPKTICLTV 393

  Fly   610 M------VRAAEAPVE-----------TSKYMGH-----GVCDIINKS----------------- 635
            :      .|:::.|:.           |||.:..     .|..|.|.|                 
pombe   394 VSRFLRKSRSSQIPMNVDISTQFIVEATSKLLRQLQQEFDVYPISNLSISFQNIIEVDRNSRGIE 458

  Fly   636 SLIKYATDDVNVITTVVLDLMKDADIPPDELRGLGIHLTRLEDANEVRKENNIKEMFGKMSEMRK 700
            ..:|.:.|::.:.|:|           ...:.|      |.:..||..:|||..|:..: .:::.
pombe   459 GFLKKSNDEIYMSTSV-----------SPSIEG------RAKLLNENMRENNSFELSSE-KDIKS 505

  Fly   701 DKPIPQGAVGDKSIGDDKVNKPLVFENKPKPREPRNVLSMLTAAAVSRKSVTEDRSQRGTSKPIT 765
            .|.:.:|                         :.:.:..||...|||:.  ||:.:         
pombe   506 PKRLKRG-------------------------KGKGIFDMLQQTAVSKP--TENSA--------- 534

  Fly   766 RPLSLVPKLDEDVLAQLPEDIRLEV-IANREEH------LCIAEYDGYRSPQYPTLRSPPLLNPY 823
                     ||....   |:...:: ::.|.||      |.|:..:.|.:...|:...|..:.| 
pombe   535 ---------DETYTC---EECEQKITLSERNEHEDYHIALSISRKERYNNLVPPSHDKPKQVKP- 586

  Fly   824 VTTNVSPLKATDLKPSTSRAAVARLQKRKERKEQEHYI-RSDQIVADYIDDLPDFVNPHILKLIS 887
                    |....|..:...|....:...:|...:.:: ....:..::....|        |.||
pombe   587 --------KTYGRKTGSKHYAPLSDETNNKRAFLDAFLGNGGNLTPNWKKQTP--------KAIS 635

  Fly   888 HPVE-MPELLMGDNYKDLLNDWVSREEVP----KPNDVDLIL--KQVSRMIKNDQLDHVCDVMKY 945
            :..: |.:|     :.||.|..|:..|..    ..::.|::|  :..||::....:...|..:..
pombe   636 NSSDNMTQL-----HLDLANSTVTCSECSMEYNSTSEEDILLHSRFHSRVLGGVTVSFQCSPIYR 695

  Fly   946 WCRIINMKRSSSCCWH-------VAYKHIEES---IQNQM-------LTIEGY-SLLFIEYIRCI 992
                :|...||.|.:.       :..:..||:   :.|::       :.::.| :.|||...:|:
pombe   696 ----VNYGLSSDCIYSINSESSLIDQRKAEEALSFVNNELSSEPIETIGVDKYTTFLFISDKKCV 756

  Fly   993  992
            pombe   757  756

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rev1NP_612047.1 BRCT_Rev1 39..121 CDD:349351
PolY_Rev1 218..676 CDD:176455 105/559 (19%)
Rev1_C 890..985 CDD:213388 20/119 (17%)
eso1NP_596778.1 PolY_Pol_eta 30..446 CDD:176456 93/478 (19%)
zf_UBZ 536..567 CDD:465769 7/33 (21%)
zf-C2H2_3 643..679 CDD:464013 8/40 (20%)
Acetyltransf_13 797..853 CDD:464015
Blue background indicates that the domain is not in the aligned region.

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