DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rev1 and rev-1

DIOPT Version :10

Sequence 1:NP_612047.1 Gene:Rev1 / 38079 FlyBaseID:FBgn0035150 Length:995 Species:Drosophila melanogaster
Sequence 2:NP_495663.1 Gene:rev-1 / 174275 WormBaseID:WBGene00014066 Length:1027 Species:Caenorhabditis elegans


Alignment Length:866 Identity:253/866 - (29%)
Similarity:409/866 - (47%) Gaps:181/866 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EDNGFSEWGGYFEAKKSKLEEQF-AAASDPFRK-SDLFQGISIFVNGRTDPSADELKRIMMVHGG 67
            |.|.|::   |...|.:||..|. ...:.|... |.:.:|.|:||||.|||.|..::.:|:.|||
 Worm   222 EINNFND---YMRMKITKLNHQVNHGYAKPLENVSRIMEGFSVFVNGYTDPPALVIRDLMISHGG 283

  Fly    68 TFH-HYERSHTTYIIASVLPDVKVRNMNLSK-FISAKWVVDCLEKKKIVDYKPYLLYTNQKTSQP 130
            .:| :|:...|:|.|||.:...|:..:..:: ||.|.|:.:.:...|.:||:.:|:|        
 Worm   284 EYHCYYQHGITSYTIASSIATAKINRIRENEIFIKADWITESIAAGKPLDYRDFLIY-------- 340

  Fly   131 MLIFGKPKDNGANESKSDVEPPKDKAEVEVDSTKDETQMELGGILKNLQQAVATSPEKEASASES 195
                                                   |.|.:.|...|...|           
 Worm   341 ---------------------------------------EKGSVEKGQMQQFLT----------- 355

  Fly   196 KITNLSTTSNNSTTART----AADPNFLSEFYKNSRLHHIATLGAGFKQYVC--RLRQKHGTQGF 254
             |:..:|..||.||:..    |.:|||:.::|..||||.|:||....|.:|.  :|..|...:.|
 Worm   356 -ISTRNTGGNNETTSSNQFSDARNPNFIRDYYARSRLHLISTLAQDMKDFVANLKLEGKLTEKCF 419

  Fly   255 PKRE--TLKSLANSHHNCLERYVMHIDMDCFFVSVGLRTRPELRGLPIAVTHSKG--GNAATDVP 315
            .::|  .:|||:|....  |..|.|:|:|||||||.:|.|.:|:...:|:|||||  .|      
 Worm   420 EEKELIDMKSLSNEISR--ESTVFHVDLDCFFVSVAVRNRIDLKHKEVAITHSKGTISN------ 476

  Fly   316 VHPQADRKAELELFAQRFEHHFHDGDKAEKVRSGFDKKMSLSEIASCSYEAREKGIRNGMFVGQA 380
                                                   |:||:|||||.||:.|::|||.|..|
 Worm   477 ---------------------------------------SMSEVASCSYAARDCGVKNGMLVRDA 502

  Fly   381 LKLCPELKTIPYDFEGYKEVAFTLYDTVAQYTLNIEAVSCDEMFVELTDLA--HELNVDVMAFVS 443
            |:.||:|..:||.||.|.:|:..:|:.:|.|||.:.|||||||::.::...  :|:| |......
 Worm   503 LQKCPQLTLLPYQFEDYVQVSRKIYEILASYTLEVRAVSCDEMYINMSSFCEKYEIN-DPTILAE 566

  Fly   444 HLRQEVYSKTGCPCSAGVAGNKLLARMATKEAKPNGQFLLDS--SNDILAYMAPMSLDLLPGVGS 506
            |:|:.:..||.||.|.|:....||||:||:.|||:|.|.:::  .|:   :::...:..|||.|.
 Worm   567 HIRKVIREKTQCPASVGIGSTSLLARLATRHAKPDGVFWVNAHKKNE---FISEEKVKDLPGFGY 628

  Fly   507 SISHKLKQ--AGLNNCGDVQNTTLEKMEKVLGKKLGQNLFQNCRGIDDRPLAY--EQIRKTVSAE 567
            .:.::|..  ..:..|.::|..|..::..|.|.||...:.:.||||::.|..:  ..:||:||.:
 Worm   629 EMMNRLTSFFGDITKCRELQLKTERELVPVFGPKLASKILRQCRGIEEDPDDFWATHVRKSVSCD 693

  Fly   568 MNFGIRFTNSVECEQFLCQLSEEVTKRLVEIRRKARSINLKIMVRAAEAPVETSKYMGHGVCDII 632
            :|:|||||...|..|.:..:..|:.::|::.:..|.||.||:|||:|.||::|||:||||:||..
 Worm   694 INYGIRFTKRGEVIQLMTAIGAELERKLIDSKLTAGSITLKLMVRSANAPIQTSKFMGHGICDTF 758

  Fly   633 NKSSLIKYATDDVNVITTVVLDLMKDADIPPDELRGLGIHLTRLEDANEVRKENNIKEMFGKMSE 697
            .|:..:...|.....:|:..:.|........::|||:|:...:|:...:......::|||||.|.
 Worm   759 TKTCNLNVPTTRGESLTSEAMKLYAKVSPKVEDLRGVGVTCGKLKSKLKKDAATAVQEMFGKTSR 823

  Fly   698 MRKDKPIPQGAVGDKSIGDDKVNKPLVFENKPK-PREPRNVLSMLTAAAVSRKSVTEDRSQRGTS 761
                       ||:.:..|:::|  ::..|:.: .:||           |...:||||...:...
 Worm   824 -----------VGNMARTDEQLN--IIPRNEDELDKEP-----------VIIPAVTEDLEVQSIP 864

  Fly   762 KPITRPLSL---VPKLDEDVLAQLPEDIRLE--------VIANREEHL-CIAEYDGYRSPQYPTL 814
            :.|...::.   :|::.:..|.....|..||        ::.||...| ||.:.:       ||.
 Worm   865 RQINFRVANDIDIPEIVKSTLLNGRSDNNLELEDLEDDGLVENRLAELECIIQNE-------PTK 922

  Fly   815 RSPPLLNPYVTT--NVSPLKA 833
            .|...|...::|  |...|.|
 Worm   923 ESVTNLQEMLSTLLNYGKLSA 943

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rev1NP_612047.1 BRCT_Rev1 39..121 CDD:349351 29/83 (35%)
PolY_Rev1 218..676 CDD:176455 160/471 (34%)
Rev1_C 890..985 CDD:213388
rev-1NP_495663.1 BRCT 255..339 CDD:469589 29/83 (35%)
PolY_Rev1 381..802 CDD:176455 160/471 (34%)
Blue background indicates that the domain is not in the aligned region.

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