DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rev1 and DNApol-eta

DIOPT Version :10

Sequence 1:NP_612047.1 Gene:Rev1 / 38079 FlyBaseID:FBgn0035150 Length:995 Species:Drosophila melanogaster
Sequence 2:XP_321730.6 Gene:DNApol-eta / 1281773 VectorBaseID:AGAMI1_004691 Length:929 Species:Anopheles gambiae


Alignment Length:749 Identity:153/749 - (20%)
Similarity:262/749 - (34%) Gaps:239/749 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   269 NCLERYVMHIDMDCFFVSVGLRTRPELRGLPIAVTHS---KGGNAATDVPVHPQADRKAELELFA 330
            |..:|.|:.:|||||:..|..:..|.:||.||||...   :||.                     
Mosquito    11 NKFDRVVVLVDMDCFYCQVEEKLNPAIRGKPIAVVQYNPWQGGG--------------------- 54

  Fly   331 QRFEHHFHDGDKAEKVRSGFDKKMSLSEIASCSYEAREKGIRNGMFVGQALKLCP--ELKTIPY- 392
                                        |.:.:|.||.:|:...|...:|.:.||  ||..:|. 
Mosquito    55 ----------------------------IIAVNYPARAEGVTRHMRGDEAKQHCPEIELPQVPQV 91

  Fly   393 ----DFEGYKEVAFTLYDTVAQYTLNIEAVSCDEMFVELTDLA----HELN-------------- 435
                |...|:|....:.|.:..:|..:|..|.||.::::|:..    ||:|              
Mosquito    92 RGKADLTRYREAGKEVADVLKSFTPLLERASIDEAYLDITERVLTRIHEMNEGKFQLRPEKLANT 156

  Fly   436 --------------------------------------VDV-----MAFVSHLRQEVYSKTGCPC 457
                                                  .|:     .:.|:.:|..|..:||..|
Mosquito   157 FAVGYENIGEFITKLSNTFDPAGGTAESNSQERLEYKKSDIKLLVGASIVNEIRAAVKERTGFEC 221

  Fly   458 SAGVAGNKLLARMATKEAKPNGQFLLDSSNDILAYMAPMSLDLLPGVGSSISHKLKQAGLNNCGD 522
            |||:|.||:||::.....|||.|.:| ..|.|......:.|..:.|:|..:..::       |..
Mosquito   222 SAGIAHNKILAKLTAGFHKPNKQTIL-PINSIPKLYETLPLKKVKGLGGKLGDQV-------CEV 278

  Fly   523 VQNTTLEKM----EKVL----GKKLGQNLFQNCRGIDDRPLAYEQIRKTVSAEMNFGIR--FTNS 577
            ::...:.::    |.||    .:::|..::...||||...:..:...|::.....|..:  .|..
Mosquito   279 LKIKFMSELVQFPESVLQQHFEQRMGSWMYLMARGIDLEAVTAKFHSKSIGCCKRFPGKNAITGL 343

  Fly   578 VECEQFLCQLSEEVTKRLV----EIRRKARSINLKIMVRAAEAPVETSKYMGHGVCDIINKSSLI 638
            .....:|.:|:.|||:||.    |..|.|:.:.:....:.....|.:::.:           :|:
Mosquito   344 ATLHHWLNELASEVTERLEKDLDENNRTAKQLTVSYSQQIDNVDVSSTRSI-----------ALV 397

  Fly   639 KYATDDVNVITTVVLDLMK----------DADIPPDELRGLGIHLTRLEDANEVRKENNIKEMFG 693
            .|   |...|....||.:|          ......:.::.|||...:.| .|...|...||:||.
Mosquito   398 AY---DAERIAADALDAIKRNTERFFASNSTTALHNPIKFLGISAGKFE-PNGAGKGAGIKQMFQ 458

  Fly   694 KMS-------------EMRK----DKP-----IPQGAVGDK------SIGDDKVNKPLVFENKPK 730
            ..|             |.||    :.|     :|:||...|      ..|:|..|      .:|.
Mosquito   459 SYSSKAANADEPPRETERRKSVSGETPDVVTELPKGAGSSKEEQQQIEKGNDASN------GEPS 517

  Fly   731 PREPR--NVLSMLTAAAVSRKSVTED-------RSQRGTSKPITRPLSLVPKLDEDVLAQLPEDI 786
            ..:.|  :.|...:|.|....|.:|:       .|:..:|:.:.:|.| .||..   :||.   :
Mosquito   518 KLKGRIQHFLQRQSALAPGSTSKSEETGSEAKTASESSSSEEVNQPES-KPKKG---IAQF---L 575

  Fly   787 RLEVIANREEHLCIAEYDGYRSPQYPTLRSPPLLNPYVTTNVSPLKATD--LKPSTSRAAVARLQ 849
            :.:...::|..|...:           ||..|.....:..:..|.|..:  |||.:.      :|
Mosquito   576 QPKCAISKESSLGSGD-----------LRKSPSTVESIEPSAKPKKGIEQFLKPKSD------IQ 623

  Fly   850 KRKE---RKEQEHYIRSDQIVADYIDDLPDFVNP 880
            |..:   .:|:|.....:.....|:||..:...|
Mosquito   624 KESDTGNEQEKEENTNDEAETVPYLDDTVELAVP 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rev1NP_612047.1 BRCT_Rev1 39..121 CDD:349351
PolY_Rev1 218..676 CDD:176455 101/501 (20%)
Rev1_C 890..985 CDD:213388
DNApol-etaXP_321730.6 None
Blue background indicates that the domain is not in the aligned region.

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