DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3402 and Sdcbp2

DIOPT Version :8

Sequence 1:NP_612045.1 Gene:CG3402 / 38077 FlyBaseID:FBgn0035148 Length:123 Species:Drosophila melanogaster
Sequence 2:XP_017447261.1 Gene:Sdcbp2 / 311532 RGDID:1307709 Length:309 Species:Rattus norvegicus

Alignment Length:104 Identity:30/104 - (28%)
Similarity:39/104 - (37%) Gaps:32/104 - (30%)


  Fly    34 REILKCGFKIGGGIDQDYKKSPQGYT-------DYGIYVTEVHEGSPAARAGLRIHDKILQCNGY 91
            |||..|             |..:|.|       |.|::|..|...:||:..|||..|:|||.:|.
  Rat   124 REIHLC-------------KDERGKTGLRLQAVDKGLFVQLVQANTPASLVGLRFGDQILQIDGC 175

  Fly    92 DFT-MVTHK-----------KAVSYIRKNPILNMLVARK 118
            |.. ..|||           |.|..:|..|....:...|
  Rat   176 DCAGWSTHKAQKALKKASAEKIVMVVRDRPFQRTVTMHK 214

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG3402NP_612045.1 PDZ_signaling 21..116 CDD:238492 29/100 (29%)
Sdcbp2XP_017447261.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 0.667 Consistency score
TreeFam 00.000 Not matched by this tool.
10.910

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