DRSC/TRiP Functional Genomics Resources

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Protein Alignment Reg-2 and Hdhd3

DIOPT Version :10

Sequence 1:NP_612043.1 Gene:Reg-2 / 38075 FlyBaseID:FBgn0016715 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_001102981.1 Gene:Hdhd3 / 688746 RGDID:1585262 Length:251 Species:Rattus norvegicus


Alignment Length:242 Identity:69/242 - (28%)
Similarity:121/242 - (50%) Gaps:14/242 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RFRLITFDVTNTLLQFRTTPGKQYGEIGALFGARCDNNELAKNFKANWYKMNRDYPNFGRDTNPQ 70
            :.||:|:||.:||::.|...|::|.......|...:...:.:.|:..:...:..:||:|....  
  Rat     6 QMRLLTWDVKDTLIKVRRPVGEEYASKARAHGVLVEATAVEQAFRQAFRAQSHSFPNYGLSLG-- 68

  Fly    71 MEWQQWWRKLIAGTFAESGAAIPD-EKLHNFSNHLIELYKTSICWQPCNGSVELLQQLRKELKPE 134
            :..:|||..::..||..:|  :|| :.:...::.|.|.:.:...|:...|:...|:..||    .
  Rat    69 LTSRQWWMDVVLHTFRLAG--VPDAQAMAPVADQLYEDFSSPFAWRVLEGAETTLKGCRK----R 127

  Fly   135 KCKLGVIANFDPRLPTLLQNTKLDQYLDFAINSYEVQAEKPDPQIFQKAMEKSGLKNLKPEECLH 199
            ..||.|::|||.||..:|....|.::.||.:.|..|...||||:||::|::   |..::|....|
  Rat   128 GMKLAVVSNFDRRLEDILTGLGLREHFDFVLTSEAVGCPKPDPRIFREALQ---LACVEPSAAAH 189

  Fly   200 IGDGPTTDYLAAKELGWHSALVHEKSYAYLVKKYGEDIDRDHVFPSL 246
            :||....||..|:.:|.||.||  .....|.....:.:.::|:.|||
  Rat   190 VGDSYRCDYQGARAVGMHSFLV--VGAEPLDSSVRDAVPKEHILPSL 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Reg-2NP_612043.1 DREG-2 8..220 CDD:274056 62/212 (29%)
Hdhd3NP_001102981.1 DREG-2 8..210 CDD:274056 62/212 (29%)

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