DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1231 and AT1G05400

DIOPT Version :9

Sequence 1:NP_612032.1 Gene:CG1231 / 38060 FlyBaseID:FBgn0035134 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_001154305.1 Gene:AT1G05400 / 837041 AraportID:AT1G05400 Length:132 Species:Arabidopsis thaliana


Alignment Length:113 Identity:23/113 - (20%)
Similarity:35/113 - (30%) Gaps:40/113 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 RHISAWLAKNYTEVGLEAPPVKRLAKQGP-----------TGPNAFHCELCNLDLTSSMHAR--- 178
            |..|:.|.||:.           ||..||           .||.::.|.:|.......:..:   
plant    38 REASSTLWKNFL-----------LADPGPLEEEEDSCSETPGPASWICSVCRRICGPGIAGQGVD 91

  Fly   179 ---QHYLGRKHKRVEQGVAKPSGARHCDTSVGRYGIGSLFRKPESLTK 223
               .|...|:|:...|....|.|....|:.            ||:.|:
plant    92 NFITHLSTREHELKRQRFTNPKGEPPLDSC------------PENATR 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1231NP_612032.1 C2H2 Zn finger 104..163 CDD:275371 11/45 (24%)
zf-met 104..126 CDD:289631
zf-met 163..186 CDD:289631 4/28 (14%)
C2H2 Zn finger 164..186 CDD:275371 4/27 (15%)
UFD2 255..>338 CDD:227443
ZnF_U1 304..336 CDD:197732
AT1G05400NP_001154305.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1565630at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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