DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG1231 and AT1G05400

Sequence 1:NP_612032.1 Gene:CG1231 FlyBaseID:FBgn0035134 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_001154305.1 Gene:AT1G05400 AraportID:AT1G05400 Length:132 Species:Arabidopsis thaliana

Alignment Length:113 Identity:23/114 (20%)
Similarity:35/114 (31%) Gaps:40/114 (35%)


  Fly   128 RHISAWLAKNYTEVGLEAPPVKRLAKQGP-----------TGPNAFHCELCNLDLTSSMHAR--- 178
            |..|:.|.||:.           ||..||           .||.::.|.:|.......:..:   
plant    38 REASSTLWKNFL-----------LADPGPLEEEEDSCSETPGPASWICSVCRRICGPGIAGQGVD 91

  Fly   179 ---QHYLGRKHKRVEQGVAKPSGARHCDTSVGRYGIGSLFRKPESLTK 223
               .|...|:|:...|....|.|....|:.            ||:.|:
plant    92 NFITHLSTREHELKRQRFTNPKGEPPLDSC------------PENATR 127

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG1231NP_612032.1 C2H2 Zn finger 104..163 CDD:275371 11/46 (24%)
zf-met 104..126 CDD:289631
zf-met 163..186 CDD:289631 4/29 (14%)
C2H2 Zn finger 164..186 CDD:275371 4/28 (14%)
UFD2 255..>338 CDD:227443
ZnF_U1 304..336 CDD:197732
AT1G05400NP_001154305.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 D1565630at2759
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
11.010

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