DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1231 and Zmat3

DIOPT Version :9

Sequence 1:NP_612032.1 Gene:CG1231 / 38060 FlyBaseID:FBgn0035134 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_071993.1 Gene:Zmat3 / 64394 RGDID:620134 Length:289 Species:Rattus norvegicus


Alignment Length:322 Identity:72/322 - (22%)
Similarity:102/322 - (31%) Gaps:136/322 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 KANGDLALFP----GRDESYP---EE-----------LNRLIGPLNCQLCKVQMTSRKRARDHYE 122
            ::.|.|.|.|    |::.|.|   ||           |..|..||.|:||.|.:.|.::|:.||:
  Rat    26 RSTGTLQLPPQKAFGQEASLPLAGEEDLAKRGEPDSALEELCKPLFCKLCNVTLNSAQQAQAHYQ 90

  Fly   123 SKAHDRHISAWLAKNYTEVGLEAPPVKRLAKQG--------PTGPNAFHCELCNLDLTSSMHARQ 179
            .|.|.:.:..:.|.|      ..||..|::...        |..|....|               
  Rat    91 GKNHGKKLRNYYAAN------SCPPPARMSSVAEPVATPLVPVPPQVGSC--------------- 134

  Fly   180 HYLGRKHKRVEQGVAKPSGARHCDTSVGRYGIGSLFRKPESLTKDSPTDVLISENSVIKSDDNER 244
                           ||.|                                    .||.:.:|: 
  Rat   135 ---------------KPGG------------------------------------RVILATEND- 147

  Fly   245 TCHLCKIVVTSAAQMQAHLAGARHQKNWRTSRQDQNHS-----EAPIPETEKLDA---------- 294
            .|.||....:|.|..|||..|..|.|..|.: :.|:||     ||....|.|..:          
  Rat   148 YCKLCDASFSSPAVAQAHYQGKNHAKRLRLA-EAQSHSFSDSAEAGQRRTRKEGSEFKMVTTRRN 211

  Fly   295 ---------------------AELALYRTPMGQYYCQPCNMMMNHESTLQQHFIGKKHLKRV 335
                                 .:||:..||.||:||..||:....|...:||...|:|..:|
  Rat   212 MYTVQSNSGPYFNARSRQRIPRDLAMCVTPSGQFYCSMCNVGAGEEVEFRQHLESKQHKSKV 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1231NP_612032.1 C2H2 Zn finger 104..163 CDD:275371 17/66 (26%)
zf-met 104..126 CDD:289631 9/21 (43%)
zf-met 163..186 CDD:289631 1/22 (5%)
C2H2 Zn finger 164..186 CDD:275371 1/21 (5%)
UFD2 255..>338 CDD:227443 32/117 (27%)
ZnF_U1 304..336 CDD:197732 12/32 (38%)
Zmat3NP_071993.1 ZnF_U1 67..101 CDD:197732 12/33 (36%)
C2H2 Zn finger 72..94 CDD:275371 9/21 (43%)
ZnF_U1 144..177 CDD:197732 12/33 (36%)
C2H2 Zn finger 149..171 CDD:275371 9/21 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 180..202 7/21 (33%)
ZnF_U1 242..276 CDD:197732 12/32 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 265..289 3/9 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342056
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1565630at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9021
orthoMCL 1 0.900 - - OOG6_111409
Panther 1 1.100 - - LDO PTHR46786
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.850

Return to query results.
Submit another query.