DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1231 and znf346

DIOPT Version :9

Sequence 1:NP_612032.1 Gene:CG1231 / 38060 FlyBaseID:FBgn0035134 Length:345 Species:Drosophila melanogaster
Sequence 2:XP_002936996.3 Gene:znf346 / 100135716 XenbaseID:XB-GENE-967544 Length:354 Species:Xenopus tropicalis


Alignment Length:289 Identity:61/289 - (21%)
Similarity:116/289 - (40%) Gaps:50/289 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 NGDLALFP-GRD--ESYPEELNRLIGPLNCQLCKVQMTSRKRARDHYESKAHDRHISAWLAKNYT 139
            :||....| |::  ::...|.:.:.....|::|...:.|..:...||:|:.|...:..:::.:..
 Frog     7 DGDTVELPVGKEAVDALIRENSHIFSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMSIHQG 71

  Fly   140 EVGLEAPPVKRLAKQGPTGPNAFH-CELCNLDLTSSMHARQHYLGRKH-----KRVEQGVAKPSG 198
            |..:.|...|....:...|.:... |.:||:..:|.:.|..||.|:.|     .|.:.||.:   
 Frog    72 EELVSAKKFKAAPAESSDGDDRSKCCPICNMTFSSPVVAESHYSGKTHIKNLRLREQGGVTE--- 133

  Fly   199 ARHCDTSVGRYGIGSLFRKPESLTKDSPTDVLISENSVIKSDDNERTCHLCKIVVTSAAQMQAHL 263
                         |.|.:..:.:...:||.....:|.:.:||.. :.|.||.....:....:.|.
 Frog   134 -------------GMLHQAKKLVVTRTPTIATKIDNRMDQSDPT-KFCKLCHATFNNPLMAEQHY 184

  Fly   264 AGARHQKNWRTSRQ------DQNHSEAPIPETEKLDAAELAL-YRTPM------GQ-YYCQPCNM 314
            ||.:|:|. .|..|      ...|:.|..|         :|: ..:|:      |: :.|..||:
 Frog   185 AGKKHKKQ-ETKTQLMTIYTSSGHTPAQAP---------IAINVNSPLPGSGSAGKGFSCDTCNI 239

  Fly   315 MMNHESTLQQHFIGKKHLKRVKNLSQTEK 343
            ::|.....|.|..|.||..::.:::...|
 Frog   240 VLNSIEQYQAHVSGAKHKNQLMSMTPLSK 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1231NP_612032.1 C2H2 Zn finger 104..163 CDD:275371 11/58 (19%)
zf-met 104..126 CDD:289631 6/21 (29%)
zf-met 163..186 CDD:289631 8/23 (35%)
C2H2 Zn finger 164..186 CDD:275371 8/21 (38%)
UFD2 255..>338 CDD:227443 22/96 (23%)
ZnF_U1 304..336 CDD:197732 10/38 (26%)
znf346XP_002936996.3 ZnF_U1 36..65 CDD:197732 7/28 (25%)
C2H2 Zn finger 36..58 CDD:275371 6/21 (29%)
ZnF_U1 92..126 CDD:197732 9/33 (27%)
C2H2 Zn finger 97..119 CDD:275371 8/21 (38%)
ZnF_U1 165..195 CDD:197732 8/30 (27%)
C2H2 Zn finger 167..189 CDD:275371 6/21 (29%)
zf-met 232..256 CDD:403930 7/23 (30%)
C2H2 Zn finger 234..256 CDD:275371 7/21 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 69 1.000 Inparanoid score I5163
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1565630at2759
OrthoFinder 1 1.000 - - FOG0001854
OrthoInspector 1 1.000 - - otm47911
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.970

Return to query results.
Submit another query.