DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg and F57H12.5

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:NP_501331.1 Gene:F57H12.5 / 177592 WormBaseID:WBGene00019020 Length:543 Species:Caenorhabditis elegans


Alignment Length:354 Identity:74/354 - (20%)
Similarity:117/354 - (33%) Gaps:114/354 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   659 TEARKPANAPKNRYRDISPYDCTRVSL-------VNSLTGDYINAN----------------YVN 700
            |||.: ||..:||......||..||.|       ||     ||||:                ||:
 Worm   237 TEAFE-ANKVRNREGCPKIYDENRVQLNRPGHEDVN-----YINASVITLTDVCRRMACVPAYVH 295

  Fly   701 MEIPGGAV----NRYIATQGPL---ASTTTDFWRMVQQESSHLLVMLTTVMESGRQKCHQYWPVT 758
            :.:....:    ::.|..|.|.   .|...|||.|:.||..||:                |..|.
 Worm   296 LVVLYFVIFQFEHKLIVAQLPQMENESFVEDFWYMIYQEQIHLV----------------YLMVP 344

  Fly   759 GEELQLAEGFSVRCLSEKPDETGSFVF--REFVLKDKHEQRHIHHMQYLAWPDHCVPSDPNLFLE 821
            .::|:..      ..|...||.|.:.:  :.|:...:.:                |..||.   |
 Worm   345 DDKLKNT------TTSLFNDENGGYQYTGKMFINNRRAD----------------VSGDPK---E 384

  Fly   822 FTERVRAARNR-TLLQEIEESLKQVRLMDADADADENGGLMRERKCAASNGATPEDETPVSTSVH 885
            :|..|....|. :::.::........|..                        |....|:...:|
 Worm   385 YTIEVLPEGNSDSVICQVHHHAPWKHLQQ------------------------PPKTLPIIKMIH 425

  Fly   886 QCIS---AANPPVIVHCSAGIGRTGVLILMDTALALMEAREPVYP--LDIVRTMRDQRACMVQNV 945
            |.:|   ..|..|.|....|.||....|  ....|:.:....:.|  .:|::.::.||...|::.
 Worm   426 QFLSEKQVQNAGVCVVSLFGCGRACSFI--GALYAINQLNNGIEPNICEIMKNIKQQRPGGVESF 488

  Fly   946 SQYRFVCECICAAYMKISR--SSAAINDD 972
            :||..: ..|...|:...|  ..|.:|.|
 Worm   489 AQYASI-YAIVFDYIARKRGGKKAPVNKD 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604
FERM_N 38..102 CDD:286467
FERM_M 125..232 CDD:278785
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010
FA 333..369 CDD:285894
PDZ_signaling 502..589 CDD:238492
Y_phosphatase 666..955 CDD:278528 64/326 (20%)
PTPc 668..955 CDD:238006 63/324 (19%)
F57H12.5NP_501331.1 PTPc 220..500 CDD:214550 69/336 (21%)
PTPc 255..498 CDD:304379 61/315 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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