DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and AT1G12760

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_172736.2 Gene:AT1G12760 / 837832 AraportID:AT1G12760 Length:408 Species:Arabidopsis thaliana


Alignment Length:94 Identity:35/94 - (37%)
Similarity:54/94 - (57%) Gaps:8/94 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   260 RFRYMQAKDQQSRNLCSVTKKAIMKIPTKTGKFSD-EKDL---DSDCCAICIEAYKPTDTIRILP 320
            :||.:...::.:.:....|.:.||   |:.|..|. |..|   |::|| ||:.||:....:|.||
plant   310 KFRKLGDANKHTNDEAQGTTEGIM---TECGTDSPIEHTLLQEDAECC-ICLSAYEDGTELRELP 370

  Fly   321 CKHEFHKNCIDPWLIEHRTCPMCKLDVLK 349
            |.|.||.:|:|.||..:.|||:||.::||
plant   371 CGHHFHCSCVDKWLYINATCPLCKYNILK 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 33/90 (37%)
RING-H2_RNF130-like 302..347 CDD:438330 22/44 (50%)
AT1G12760NP_172736.2 RING-H2_RNF6-like 352..394 CDD:438130 20/42 (48%)
Blue background indicates that the domain is not in the aligned region.

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