DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and ATL63

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_200666.1 Gene:ATL63 / 835972 AraportID:AT5G58580 Length:308 Species:Arabidopsis thaliana


Alignment Length:365 Identity:79/365 - (21%)
Similarity:128/365 - (35%) Gaps:126/365 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 VRTISSLNRTSVLFVSISFIVLMIISLVWLIFYYIQRFRYM------------QAKDQQSRNLCS 276
            ::.:||.| ::||..::.|::|:::.::.|.||  .||.:.            :.:.:::|....
plant    19 LKILSSYN-SNVLLAALVFLLLVVLFVLLLHFY--ARFFWSPSHQDFSAAARHRRRRRRNRRRTV 80

  Fly   277 VTKKAIMKIPTKTGKFS------------DEKDLDSDC---------------------CAICIE 308
            .|.:.|..:|  .|.|.            |:|.|||..                     |.||:.
plant    81 TTTRIIPSLP--LGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENEEEEDEEEECVICLG 143

  Fly   309 AYKPTDTIRIL-PCKHEFHKNCIDPWLIEHRTCPMCKLDVLKFYGYVFLGSEESILEYQPDPPQG 372
            .::..|..|.| .|.|.||..|||.||..|.|||:|:..||...      |:|..|:...:..:.
plant   144 LWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAV------SDEENLKLAVNAVEE 202

  Fly   373 LALVEARDESADLNRSRDFVVDFPRVFVLDSGCVVGAREMLFPCRIPERSQSSLSLRQARDWVSL 437
            .|.|..:...|..|.|.                |.|.|.:            ||||....|.:..
plant   203 EAEVRLQMSPAGENESN----------------VSGDRRV------------SLSLSVMEDDLKT 239

  Fly   438 MSNKLEEQQGLRSMRNDEMQQQLLSARESARHRRSRSADGRYSTGCFGGRQRQPSVLVSSLGQPQ 502
            ..:..||:..:....:||   ::......:..|||.|                            
plant   240 GDDDGEEEVRIEVFDDDE---EINDGGTRSDRRRSMS---------------------------- 273

  Fly   503 LHSEVAQMQRSNSSQALKHLTDAAHAQSRQRQRESFDFAR 542
                   |..|.||..::.|:.::   ||..:.:.|..||
plant   274 -------MTSSASSSLMRMLSSSS---SRSERNKVFPTAR 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 38/155 (25%)
RING-H2_RNF130-like 302..347 CDD:438330 20/66 (30%)
ATL63NP_200666.1 RING-H2_EL5-like 138..180 CDD:438124 19/41 (46%)
Blue background indicates that the domain is not in the aligned region.

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