DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and AT5G47610

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_199572.1 Gene:AT5G47610 / 834811 AraportID:AT5G47610 Length:166 Species:Arabidopsis thaliana


Alignment Length:119 Identity:30/119 - (25%)
Similarity:60/119 - (50%) Gaps:12/119 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 SVLFVSISFIVLMIISLVWLIFYYIQRFRYMQAKDQQSRNLCSVTKKAIMKIP-TKTGKFSDEKD 297
            |||.:.:...::..:||...|..:::  ..::.:|....:    .:.|....| |.|..:|.:.:
plant    41 SVLLILVISALICALSLYAAIRCFLR--PTLETEDDHKPD----PEAAASSTPTTPTLVYSSDLE 99

  Fly   298 L---DSDCCAICIEAYKPTDTIRIL-PCKHEFHKNCIDPWLIEHRTCPMCKLDV 347
            |   ::: ||||:..::..::|::| .|:|.||..||..||....:||.|:..:
plant   100 LAGAEAE-CAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCRTSI 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 27/114 (24%)
RING-H2_RNF130-like 302..347 CDD:438330 17/45 (38%)
AT5G47610NP_199572.1 COG5540 <61..152 CDD:227827 25/97 (26%)
RING-H2_EL5-like 106..149 CDD:438124 16/43 (37%)
Blue background indicates that the domain is not in the aligned region.

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