DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and AT5G46650

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_199477.1 Gene:AT5G46650 / 834708 AraportID:AT5G46650 Length:289 Species:Arabidopsis thaliana


Alignment Length:286 Identity:57/286 - (19%)
Similarity:106/286 - (37%) Gaps:84/286 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 LFVSISFIVLMIISLVWLIFYYIQRFRYM----------------QAKDQQSRNLCSVTKKAIMK 284
            |.:.::.|:|::..:.:...|:.:.|.:.                |.:.||..          ::
plant    25 LVIILTVILLVVFFIGFFAIYFCKCFYHTLTEAWNHHYHNGLPENQIQAQQEP----------VQ 79

  Fly   285 IPTKTG------------KFSDEKDLDSDC----CAICIEAYKPTD-TIRIL-PCKHEFHKNCID 331
            .|...|            .||..|||..|.    ||||:..::... .:|:| .|.|.||:.|||
plant    80 PPVNPGLEPHIIQSYPLFPFSSVKDLREDKYGLECAICLLEFEEEHILLRLLTTCYHVFHQECID 144

  Fly   332 PWLIEHRTCPMCKLDVLKFYGYVFLGSEESILEYQPDPPQGL--ALVEARDESADLNRSRDFVVD 394
            .||..::|||:|:.::                  .|:.|:.:  .::|...|:|..||.::....
plant   145 QWLESNKTCPVCRRNL------------------DPNAPENIKELIIEVIQENAHENRDQEQTST 191

  Fly   395 FPRVFVLDSGCVVGAREMLFPCRIPERSQSSLSLRQARDWVSLMSNKLEEQQ------------G 447
            ...|.:.........|::.   .:|::...|.:...     |::.||.||:.            .
plant   192 SNEVMLSRQSSGNNERKIE---TLPDKFSRSKTTGH-----SIVRNKPEEEDRYTLRLPDHVKIK 248

  Fly   448 LRSMRNDEMQQQLLSARESARHRRSR 473
            :....|:...:..:|..|..|:|..|
plant   249 VTRRHNNNQTESCISFGELVRNREGR 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 34/143 (24%)
RING-H2_RNF130-like 302..347 CDD:438330 19/50 (38%)
AT5G46650NP_199477.1 PEX10 <65..164 CDD:227861 31/126 (25%)
RING-H2_EL5-like 113..157 CDD:438124 18/43 (42%)
Blue background indicates that the domain is not in the aligned region.

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