DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and AT4G33565

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_567926.4 Gene:AT4G33565 / 829496 AraportID:AT4G33565 Length:367 Species:Arabidopsis thaliana


Alignment Length:286 Identity:66/286 - (23%)
Similarity:114/286 - (39%) Gaps:85/286 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 NRTSVLFVSISFIVLMIISLVWLI----FYYIQRFRYMQAKD---QQSRN------LCSVTKKAI 282
            |...:|.:|.|.|:..:..|..|:    |||.:|.....::.   :::||      ...:....|
plant   120 NLKRILIISASSIITTLFLLTLLVLCFKFYYRRRRSITTSRRWSMEEARNWDFDGPAPVIVDHPI 184

  Fly   283 MKIPT-----------KTGKFSDEKD--LDSDCCAICIEAYKPTDTIRILP-CKHEFHKNCIDPW 333
            ..|.|           |..::| :||  ::...|::|:..::..:|:|:|| |||.||..|||.|
plant   185 WHIRTIGLNPTVISSIKVCQYS-KKDGVVEGTDCSVCLSEFEEEETLRLLPKCKHAFHLYCIDTW 248

  Fly   334 LIEHRTCPMCKLDVLKFYGYVFLGSEESILEYQPDPPQGLALVEAR-------DESADLNRSRD- 390
            |..|..||:|:..:::         ..::::   |..:||..:...       |...::...|| 
plant   249 LRSHTNCPLCRAPIVE---------ANTMID---DHSEGLEEISVMIPEENGDDTDEEIEEERDG 301

  Fly   391 FVVDFPRVFVLDSGCVVGAREMLFPCRIPERSQSSLSLRQARDWVSLMSNKLEEQQGLRSMRNDE 455
            ||.:..|    |.|                .||.    ::.|..||     |:...|||      
plant   302 FVSNISR----DHG----------------ESQQ----QRVRRSVS-----LDSLSGLR------ 331

  Fly   456 MQQQLLSARESARHRRSRS-ADGRYS 480
             ..:::..||..:.:|..: ..||.|
plant   332 -VSEVVVGREKEKLKRGNNIGSGRSS 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 38/136 (28%)
RING-H2_RNF130-like 302..347 CDD:438330 20/45 (44%)
AT4G33565NP_567926.4 HRD1 <170..>263 CDD:227568 27/93 (29%)
RING-H2_EL5-like 216..259 CDD:438124 19/42 (45%)
Blue background indicates that the domain is not in the aligned region.

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