DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and AT4G28890

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_194618.3 Gene:AT4G28890 / 829010 AraportID:AT4G28890 Length:432 Species:Arabidopsis thaliana


Alignment Length:405 Identity:79/405 - (19%)
Similarity:145/405 - (35%) Gaps:119/405 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 ISFIVLMIISLVWLIFYYI------------------QRFR---YMQAKDQQSRNLCSVTKKAIM 283
            ::.::.::.:|.:::..|.                  :|.|   :.......|.....:.|.||.
plant    40 VTGVLAIMFALTFVLLVYAKCCHIDLRSGSGDRRRHDRRLRQGIFFNRSTASSDRFSGLDKTAIE 104

  Fly   284 KIPTKTGKFS----DEKDLDSDCCAICIEAYKPTDTIRILP-CKHEFHKNCIDPWLIEHRTCPMC 343
            .:|  ..:||    .::.||   |::|:..::..:.:|:|| |:|.||..|||.||.:|.|||:|
plant   105 SLP--LFRFSALKGSKQGLD---CSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLC 164

  Fly   344 KLDVLKFYGYVFLGSEESIL------------EYQPDPPQGLALVEARDESADLNRSRDFVVDFP 396
            :       ..|.:..:.|:|            |.:.|....| .:|..:|...::|.        
plant   165 R-------DRVSMEEDSSVLTNGNSFRFLNQSEIREDSSLEL-YIEREEEEERIHRE-------- 213

  Fly   397 RVFVLDSGCVVGAREMLFPCRIPERSQSS-LSLRQARDWVSLMSNKLEEQQGLRSMRNDEMQQQL 460
                                   |.|.|| .|:.::...:..:.||  |:..|....||:.:::|
plant   214 -----------------------ELSGSSRFSIGESFRKILKLGNK--EKTLLDEHVNDKDEKKL 253

  Fly   461 LSARESARHRRSRS---ADGRYSTGCFGGRQRQPSVLVSSLGQPQLHSEVAQMQRSNSSQALKHL 522
            :   ....||...|   ...|:|.             |||.....|:||:.....|....:|.|:
plant   254 M---HKFNHRIVVSDVVFKNRWSN-------------VSSSDLMFLNSEMVNSISSERFSSLDHV 302

  Fly   523 TDAAHAQSRQRQRESFDFARTRRRFMRRESDEISLRSL-----PRRGATSAAHRQLHRE---REP 579
                   .|..:.:.....|.:.....:...|..|.|:     ...|.:.:..|.:..|   |..
plant   303 -------KRGDEEDQIGILRIKEEMEAKRMLENKLTSMTTMFSSENGDSGSKSRSVMIEPGRRSV 360

  Fly   580 DDSVHTDQITIQVNG 594
            .|.....:::|.::|
plant   361 SDITAVPRLSISIHG 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 32/132 (24%)
RING-H2_RNF130-like 302..347 CDD:438330 19/45 (42%)
AT4G28890NP_194618.3 RING-H2_EL5-like 122..165 CDD:438124 19/45 (42%)
Blue background indicates that the domain is not in the aligned region.

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