DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and AT4G15975

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_567480.2 Gene:AT4G15975 / 827281 AraportID:AT4G15975 Length:235 Species:Arabidopsis thaliana


Alignment Length:154 Identity:44/154 - (28%)
Similarity:71/154 - (46%) Gaps:26/154 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 TSVLFVSISFIVLMIISLVWLIFYYIQRFRYMQAKDQQSRNLCSVT-------------KKAIMK 284
            |::|      |:|::|.:|.|..||  |: |:......:|...:.|             ...|..
plant     4 TTIL------ILLIVILMVSLHLYY--RW-YLLRSSPFNRTTAASTFFTDPSSTPGGLNPSIIKS 59

  Fly   285 IPTKTGKFSDEKDLDSDCCAICIEAYKPTDTIRILP-CKHEFHKNCIDPWLIEHRTCPMCKLDVL 348
            :|..|  ||....|.:..|::|:..:|..::.|::| |||.||.:|||.|...|.:||:|:..:.
plant    60 LPIFT--FSAVTALFAMECSVCLSEFKDNESGRVMPNCKHTFHVDCIDMWFHSHSSCPLCRSLIE 122

  Fly   349 KFYGYVFLGSEESILEYQPDPPQG 372
            .|.|.|....:|..:... ||..|
plant   123 PFAGGVKSTMDEVAISIS-DPVYG 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 35/123 (28%)
RING-H2_RNF130-like 302..347 CDD:438330 18/45 (40%)
AT4G15975NP_567480.2 RING-H2_EL5-like 75..118 CDD:438124 17/42 (40%)
Blue background indicates that the domain is not in the aligned region.

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