DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and AT4G09110

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_192650.1 Gene:AT4G09110 / 826489 AraportID:AT4G09110 Length:302 Species:Arabidopsis thaliana


Alignment Length:302 Identity:74/302 - (24%)
Similarity:115/302 - (38%) Gaps:75/302 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 ISFIVLMIISLVWLIFYYIQRFRY---MQAKDQQ---SRNLCSVTKKAIMKIP---------TKT 289
            |:.|||.|...:.::..::.:..|   ::|..|:   ||....:.|:.:...|         .|.
plant    52 IAIIVLAIFISLSMVACFLHKTFYRAEVEAASQEVFHSRARRGLEKELVESFPIFLYSEVKGLKI 116

  Fly   290 GKFSDEKDLDSDCCAICIEAYKPTDTIRIL-PCKHEFHKNCIDPWLIEHRTCPMCKLDVLKFYGY 353
            ||...|       ||||:..:...:|:|.: ||.|.||.||||.||....|||.|:.::....| 
plant   117 GKGGVE-------CAICLSEFVDKETLRWMPPCSHTFHANCIDVWLSSQSTCPACRANLSLKPG- 173

  Fly   354 VFLGSEESILEYQPDPPQGLAL-VEARDESADLNRSRDFVVDFPRVFVLDSGCVVGAREMLFPCR 417
                      |..|.|...|.. .|.|||.:.|.                    :|.....|..:
plant   174 ----------ESYPYPITDLETGNEQRDEHSLLQ--------------------LGTNLDRFTLQ 208

  Fly   418 IPERSQSSL-SLRQARDWVSLMSNKLEEQQGLRSMRNDEMQQQLLSARESARHRRSRSADGRYST 481
            :||..|..| ||...|.....:...:..:||.||        .....|::.|...|.|..  :|.
plant   209 LPEEMQRQLVSLNLIRTSNMTLPRAMSSRQGYRS--------GFSHGRQTLRRAISMSLS--FSL 263

  Fly   482 GCFGGRQRQPSVLVSSLGQPQLHSEVAQMQ-RSNSSQALKHL 522
                    |.:.:.|::|:..|..|.:|.: :....|:.:||
plant   264 --------QAASVRSTVGRDDLVLETSQAKDKDLCEQSFQHL 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 37/122 (30%)
RING-H2_RNF130-like 302..347 CDD:438330 21/45 (47%)
AT4G09110NP_192650.1 RING-H2_EL5-like 122..165 CDD:438124 21/49 (43%)
Blue background indicates that the domain is not in the aligned region.

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