DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and AT2G37580

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_565865.1 Gene:AT2G37580 / 818334 AraportID:AT2G37580 Length:235 Species:Arabidopsis thaliana


Alignment Length:136 Identity:38/136 - (27%)
Similarity:69/136 - (50%) Gaps:25/136 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 LNRTSVLFVSISFIVLMIISLVWLIFY-----YIQRFRYMQAKDQQSRNLCSVTKKAIMKIP--T 287
            |....::||.|:|:.  :.:||:.:|:     ..:|    .:...::.:....|..|.:..|  |
plant    59 LTPLKLIFVVIAFVA--VPALVYALFFNGPCSSSRR----NSSSSRTSSSSDDTPHATVDTPPIT 117

  Fly   288 KT-------GKF---SDEKDLDSDCCAICIEAYKPTDTIRIL-PCKHEFHKNCIDPWLIEHRTCP 341
            :|       |||   :..|::.:: |::|:..:..:|.:|.| .|||.||..||:.||.:|..||
plant   118 ETTVTSESGGKFHKDTHSKEIGNE-CSVCLMVFTDSDELRQLSECKHAFHVLCIETWLKDHPNCP 181

  Fly   342 MCKLDV 347
            :|:.||
plant   182 ICRTDV 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 35/127 (28%)
RING-H2_RNF130-like 302..347 CDD:438330 18/45 (40%)
AT2G37580NP_565865.1 RING_Ubox 141..184 CDD:473075 17/43 (40%)
Blue background indicates that the domain is not in the aligned region.

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