DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and AT2G35910

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_850254.1 Gene:AT2G35910 / 818164 AraportID:AT2G35910 Length:217 Species:Arabidopsis thaliana


Alignment Length:131 Identity:38/131 - (29%)
Similarity:60/131 - (45%) Gaps:25/131 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 VSISFIVLMIISLVWLIFYYIQRFRYMQAKDQQSRNLCSV------------------TKKAIMK 284
            :.:|..||::|:.:.|..||..|.:...:..|.:::...:                  |.::..|
plant    68 IGVSIGVLLLITTITLTSYYCTRNQLSSSPSQTNQDSTRIHHHHHHVIIDVVPGLDEDTIQSYPK 132

  Fly   285 IPTKTGKFSDEK-DLDSDCCAICIEAYKPTDTIRILP-CKHEFHKNCIDPWLIEHRTCPMCKLDV 347
            |     .:|:.| ...:.|||||:..||....:|.|| |.|.||..|||.||..:.|||:|:...
plant   133 I-----LYSEAKGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLNPTCPVCRTSP 192

  Fly   348 L 348
            |
plant   193 L 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 37/128 (29%)
RING-H2_RNF130-like 302..347 CDD:438330 23/45 (51%)
AT2G35910NP_850254.1 RING-H2_EL5-like 146..189 CDD:438124 22/42 (52%)
Blue background indicates that the domain is not in the aligned region.

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