Protein Alignment gol and Rnf148

DIOPT Version :10

• Sequence 1: NP_001163300.1
• Gene: gol / 38006
• FlyBaseID: FBgn0004919
• Length: 601
• Species: Drosophila melanogaster
• Sequence 2: NP_001178011.1
• Gene: Rnf148 / 681407
• RGDID: 1595417
• Length: 316
• Species: Rattus norvegicus
• Alignment Length: 234
• Identity: 87/234 - (37%)
• Similarity: 124/234 - (52%)
• Gaps: 21/234 - (8%)

  Fly   121 ACTPYIRGTLGAPIPDKGETWIALVRRGRCTFEEKVKHVYQQNAAGVIIYN----DKQVMQLEKM 181
            ||:|....:.    ||:.::|:||:.||.|||..|:....::.|.||||||    ..:|.   .|
  Rat    98 ACSPLTNFSR----PDQADSWLALIERGGCTFTHKINVAAEKGANGVIIYNYPGTGNKVF---PM 155

  Fly   182 QIKGKTRNIAAVITYQNIGQDLSLTLDKGYNVTISIIEGRRGVRTISSLNRTSVLFVSISFIVLM 246
            ..:| |.||.||:.....|.:|...:.:|..|||.|..||..:..:|.       :| :|....:
  Rat   156 SHQG-TENIVAVMIGNLKGMELLHLIQQGVYVTIIIEVGRMHMPWLSH-------YV-MSLFTFL 211

  Fly   247 IISLVWLIFYYIQRFRYMQAKDQQSRNLCSVTKKAIMKIPTKTGKFSD-EKDLDSDCCAICIEAY 310
            ..::.:|..|...|.|...:..::.|.:.|..||||.::..:..|..| |.|.:.|.|.:|.:.|
  Rat   212 AATVAYLFLYCAWRPRAPNSSTRRQRQIKSDVKKAIGQLQLRVLKEGDKELDPNEDSCVVCFDIY 276

  Fly   311 KPTDTIRILPCKHEFHKNCIDPWLIEHRTCPMCKLDVLK 349
            |..|.||||.|||.|||.||||||:.||||||||.|:|:
  Rat   277 KAQDVIRILTCKHFFHKTCIDPWLLAHRTCPMCKCDILR 315

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gol	NP_001163300.1	PA_GRAIL_like	73..217	CDD:239037	35/99 (35%)
		HRD1	<237..>347	CDD:227568	46/110 (42%)
		RING-H2_RNF130-like	302..347	CDD:438330	29/44 (66%)
Rnf148	NP_001178011.1	PA_GRAIL_like	56..190	CDD:239037	35/99 (35%)
		HRD1	<190..>310	CDD:227568	48/127 (38%)
		RING-H2_RNF128-like	267..315	CDD:438454	31/47 (66%)