DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and Rnf133

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001423063.1 Gene:Rnf133 / 386611 MGIID:2677436 Length:382 Species:Mus musculus


Alignment Length:292 Identity:94/292 - (32%)
Similarity:146/292 - (50%) Gaps:35/292 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 AFLNWSYVEHGNMLCNMEFAQEQARYGEGKVLNVTGRLIHITATDNFSDDYACTP---YIRGTLG 131
            |::|.|:.....||..:   .|...:|...:|.   |:..:..........||.|   :|     
Mouse    40 AYMNISFHVGNRMLSEL---GETGVFGRSSILK---RVAGVVVPPEGKIQNACDPNTTFI----- 93

  Fly   132 APIPDKGETWIALVRRGRCTFEEKVKHVYQQNAAGVIIYN----DKQVMQLEKMQIKGKTRNIAA 192
              :|...|.||||:.||.|.|.:|:|...:..|.||||||    ..||..:.....:.     ..
Mouse    94 --LPRNKEPWIALIERGGCAFTQKIKVASEHGARGVIIYNFPGTGNQVFPMSHQAFED-----IV 151

  Fly   193 VITYQNI-GQDLSLTLDKGYNVTISIIEGRRGVRTISSLNRTSVLFVSISFIVLMIISLVWLIFY 256
            |:...|| |.::...:.||.:||:.:..||:.|..::        ...:||:::...:|.:..||
Mouse   152 VVMIGNIKGMEILHLIRKGVHVTVMVEVGRKHVIWLN--------HYFVSFMIVTTATLAYFTFY 208

  Fly   257 YIQRFRYMQAKDQQSRNLCSVTKKAIMKIPTKTGKFSDEK-DLDSDCCAICIEAYKPTDTIRILP 320
            :|:|....:.::::.:.|....|||..::..:..|..||: :.::|.|.||.|||||.:.:|||.
Mouse   209 HIRRLWVARIENRRWKRLTRELKKAFGQLQVRVLKEGDEEVNPNADSCVICFEAYKPNEIVRILT 273

  Fly   321 CKHEFHKNCIDPWLIEHRTCPMCKLDVLKFYG 352
            |||.|||||||||::.|.||||||.|:||..|
Mouse   274 CKHFFHKNCIDPWILAHGTCPMCKCDILKALG 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037 41/151 (27%)
HRD1 <237..>347 CDD:227568 45/110 (41%)
RING-H2_RNF130-like 302..347 CDD:438330 30/44 (68%)
Rnf133NP_001423063.1 PA_GRAIL_like 43..177 CDD:239037 41/151 (27%)
HRD1 <183..>297 CDD:227568 44/121 (36%)
RING-H2_RNF128-like 254..302 CDD:438454 32/47 (68%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 328..382
Blue background indicates that the domain is not in the aligned region.

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