DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and AT4G24015

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_974604.1 Gene:AT4G24015 / 2745724 AraportID:AT4G24015 Length:174 Species:Arabidopsis thaliana


Alignment Length:157 Identity:39/157 - (24%)
Similarity:72/157 - (45%) Gaps:28/157 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 LFVSISFIVLMIISLV-WLIFY--YIQR-----------FRYMQAKDQQSRNL---CSVTKKAIM 283
            |:.:..|.:.::.|:: :|:||  |::|           ...:.:..|.|.:|   |.:..|..:
plant    21 LYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSPSPMILPVSSSHQTSSHLPSVCLLDVKVEL 85

  Fly   284 KIPTKTGKFSDEKDLDSDCCAICIEAYKPTDTIRILP-CKHEFHKNCIDPWLIEHRTCPMCKLDV 347
            |.......|::|.......|.:|:..::..:.:..:| |||.||.:||..||..|.|||:|:   
plant    86 KDKLHVVLFNEELGTRDSLCCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLYSHNTCPLCR--- 147

  Fly   348 LKFYGYVFLGSEESILE---YQPDPPQ 371
                ..|.:.|.::.::   ..||.||
plant   148 ----SSVSISSTKTSVDDDNDHPDSPQ 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 32/127 (25%)
RING-H2_RNF130-like 302..347 CDD:438330 17/45 (38%)
AT4G24015NP_974604.1 HRD1 <87..>174 CDD:227568 25/91 (27%)
RING-H2_EL5-like 105..147 CDD:438124 16/41 (39%)
Blue background indicates that the domain is not in the aligned region.

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