DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and mrz1

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_596752.1 Gene:mrz1 / 2539998 PomBaseID:SPBC16G5.03 Length:268 Species:Schizosaccharomyces pombe


Alignment Length:208 Identity:53/208 - (25%)
Similarity:88/208 - (42%) Gaps:36/208 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 SDEKDLDSDCCAICIEAYKPTDTIR--ILPCKH-EFHKNCIDPWLIEHRTCPMCKLDV-LKFYGY 353
            |:.:.|..| |.||::    .|.:|  :.||.| :|..:||..|:.:..|||:||..| ..|||:
pombe    12 SNSRYLRRD-CVICLQ----KDGLRAQLSPCGHDQFDYSCICRWMDQSLTCPICKRHVDCVFYGF 71

  Fly   354 -----------VFLGSEESILEYQPDPPQGLALVEARDESADLNRSRDFVVDFPRVF-VLDSGCV 406
                       ..|||.:..:..|.......:..|..|..|||.|.|.|:  :.:.: ..::..:
pombe    72 HGSSLYKKWYTQSLGSNQYSISRQLLRQPSFSSSENTDRLADLLRVRRFI--YQKAWKSYENPSL 134

  Fly   407 VGAREMLFPCRIPERSQSSLSLRQARDWVS---LMSNKLEEQQ---------GLRSMRNDEMQQQ 459
            ...|:...|..|...|.:|| |::...:::   |:...|:..|         ||..::|.:..|.
pombe   135 SSHRQYQIPTPIQLASSASL-LKKVESFIAKELLLFEYLDGHQINFIQIFLMGLLRVQNIQHPQT 198

  Fly   460 LLSARESARHRRS 472
            :....|...|..|
pombe   199 IDELAEFIGHEES 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 20/56 (36%)
RING-H2_RNF130-like 302..347 CDD:438330 17/47 (36%)
mrz1NP_596752.1 RING_Ubox 20..65 CDD:473075 18/49 (37%)
Blue background indicates that the domain is not in the aligned region.

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