DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and Rnf13

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001106884.1 Gene:Rnf13 / 24017 MGIID:1346341 Length:381 Species:Mus musculus


Alignment Length:395 Identity:102/395 - (25%)
Similarity:158/395 - (40%) Gaps:111/395 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 GMEDRIAVDVYN------YAFLNWSYVEHGNMLCNMEFAQE-----QARYG-----EGKVLNVTG 105
            ||....|..||.      :||||...||...:..|.|.|.:     .||:|     ||    :.|
Mouse     6 GMLMLSATQVYTILTVQLFAFLNLLPVEADILAYNFENASQTFEDLPARFGYRLPAEG----LKG 66

  Fly   106 RLIHITATDNFSDDYACTPYIRGTLGAPIPDKGE-TWIALVRRGRCTFEEKVKHVYQQNAAGVII 169
            .||      |...:.||.|.:    ..|:.|... |:|.|:||..|.|:.||.:..:......|:
Mouse    67 FLI------NSKPENACEPIV----PPPLKDNSSGTFIVLIRRLDCNFDIKVLNAQRAGYKAAIV 121

  Fly   170 YN----------DKQVMQLEKMQI------KGKTRNIAAVITYQNIGQ-----DLSLTLDKGYNV 213
            :|          ...:..|:|:.|      :....::....||:..|.     :|||.|:     
Mouse   122 HNVDSDDLISMGSNDIDTLKKIDIPSVFIGESSANSLKDEFTYEKGGHIILVPELSLPLE----- 181

  Fly   214 TISIIEGRRGVRTISSLNRTSVLFVSISFIVLMIISLVWLIFYYIQRFRYMQAKDQQSRNLCSVT 278
                                   :..|.|::::.|.|:.::.:.|.:|  :|.:.:..||  .:.
Mouse   182 -----------------------YYLIPFLIIVGICLILIVIFMITKF--VQDRHRNRRN--RLR 219

  Fly   279 KKAIMKIPTKTGKFSDEKDLDSDCCAICIEAYKPTDTIRILPCKHEFHKNCIDPWLIE-HRTCPM 342
            |..:.|:|....|..||.|:    ||||:|.|:..|.:|||||.|.:|..|:||||.: .:|||:
Mouse   220 KDQLKKLPVHKFKKGDEYDV----CAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPV 280

  Fly   343 CKLDVLKFYGYVFLGSEES-----ILEYQP-DPPQGLA----------------LVEARDESADL 385
            ||..|:...|.....::.|     :.|:.| .||...|                :.|:.|...|.
Mouse   281 CKQKVVPSQGDSDSDTDSSQEENQVSEHTPLLPPSASARTQSFGSLSESHSHHNMTESSDYEDDD 345

  Fly   386 NRSRD 390
            |...|
Mouse   346 NEETD 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037 41/175 (23%)
HRD1 <237..>347 CDD:227568 40/110 (36%)
RING-H2_RNF130-like 302..347 CDD:438330 24/45 (53%)
Rnf13NP_001106884.1 PA_C_RZF_like 23..180 CDD:239038 43/170 (25%)
RING-H2_RNF13 230..288 CDD:438450 29/61 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 285..381 13/66 (20%)

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