DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and Rnf38

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_063143199.1 Gene:Rnf38 / 171501 RGDID:621856 Length:627 Species:Rattus norvegicus


Alignment Length:70 Identity:25/70 - (35%)
Similarity:42/70 - (60%) Gaps:1/70 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   277 VTKKAIMKIPTKTGKFSDEKDLDSDCCAICIEAYKPTDTIRILPCKHEFHKNCIDPWLIEHRTCP 341
            :||..|.::|:.....|:.:. :...|.:|:..::....:|:|||.||||..|:|.||..:||||
  Rat   550 LTKADIEQLPSYRFNPSNHQS-EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCP 613

  Fly   342 MCKLD 346
            :|:.|
  Rat   614 ICRAD 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 25/70 (36%)
RING-H2_RNF130-like 302..347 CDD:438330 20/45 (44%)
Rnf38XP_063143199.1 None
Blue background indicates that the domain is not in the aligned region.

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