DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2736 and scarb2c

DIOPT Version :10

Sequence 1:NP_611991.1 Gene:CG2736 / 37998 FlyBaseID:FBgn0035090 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_001352071.1 Gene:scarb2c / 337532 ZFINID:ZDB-GENE-030131-5789 Length:478 Species:Danio rerio


Alignment Length:499 Identity:111/499 - (22%)
Similarity:187/499 - (37%) Gaps:107/499 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LCLILACVNVFLFVVSWGVDYRIL------VAREHIRFRQEMPTMDSWINSPFG-KLKNYVFNVT 68
            ||::|....:.|.:.      |:|      ..::.|...........|.|.|.. .::.|.||:|
Zfish    14 LCVLLLICGIALELT------RVLQKLVNNTVKQQIVLENGTEAFSVWQNPPPPVYMQFYFFNLT 72

  Fly    69 NAEEFRSGRDSRLKVKEIGPIVYRIVGFNDILDRNETNVRYRKHRYRVVEFLPEESVAPDVLNWT 133
            |..|..||  .:..|.:|||..||..       |....|::..:..||....|:          |
Zfish    73 NPAEVMSG--DKPSVVQIGPYTYREY-------RPMEEVKFMDNGTRVAAINPK----------T 118

  Fly   134 ITSTNNVILGAATKVKHTAPLAAFGF-----DAAL--MMED--------IFVTDSVYYFLWEFTR 183
            .....|:..|:...:..|..:.|...     |:.|  ::.|        :|.|..|...||.:..
Zfish   119 YVFEPNMSRGSQDDLVRTVNIPAVTVMEKYKDSILARLISDLMKAKGVGVFETFRVGDLLWGYED 183

  Fly   184 PLLQTLSRISNIRP--NVAVLYNALKEKEEVYTVNIGPKRGIENFFRIETLNGEVIIREQLPHTR 246
            |||:.|..:.   |  :..:.|.....:.:.|.:..| |...::|..|:..||:..:       .
Zfish   184 PLLKELHMLV---PDDHFGLFYKKNGTEYDSYVLLTG-KPDYQDFASIDEWNGQRSL-------N 237

  Fly   247 QYDSNSCPFNVSGALDNSLFPPFVQPDTPLSIVAIESCRVLPLTYQRQERYNGLDTFRYTLLQSH 311
            .:.|..|  |:....|.:.|.|.:.....|.|.:.:.||.|.:.|:......|:..||:.     
Zfish   238 WWSSEEC--NMINGTDGASFHPIITKADRLYIFSSDLCRSLYVQYECDVSVQGVPGFRFV----- 295

  Fly   312 QKPPGCLDTSYGVKLPD--------------GMFDVSQCVINDAPSAFSMPHFYGSSYNWSQHYE 362
              ||..:.:|..:. ||              |:.:.|.|. ..||...|.||||.:...:.....
Zfish   296 --PPADVFSSPDIN-PDNAGFCVPPGHCLGSGLLNASVCK-QGAPIIMSSPHFYQADQKFVDDIW 356

  Fly   363 GYTPNAEDHEPYILLEPVTGIPVTEKYRFQSNIPIPDLRRFSSRLSRFSNMMIP-------SFWY 420
            |..|..|:|:.:..:.|:|||.:....|.|.|:.:.....| |:..:...::.|       :|..
Zfish   357 GMKPIKEEHQTFADINPLTGIVLQGAKRVQVNVYLQQHSSF-SQTGKIQTLVFPVMYINESAFID 420

  Fly   421 EFEMGQLPGFVTSLMWINVNIVQHIQPYCM--------VLFLVL 456
            |....:|...|     :|.|:|.:| |:.:        ::|:||
Zfish   421 EESAKKLHAVV-----LNANVVINI-PFIVISVGILLGIIFIVL 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2736NP_611991.1 CD36 10..464 CDD:460076 111/499 (22%)
scarb2cNP_001352071.1 CD36 13..459 CDD:460076 111/499 (22%)

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