DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2736 and Scarb1

DIOPT Version :10

Sequence 1:NP_611991.1 Gene:CG2736 / 37998 FlyBaseID:FBgn0035090 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_001192012.1 Gene:Scarb1 / 20778 MGIID:893578 Length:520 Species:Mus musculus


Alignment Length:510 Identity:120/510 - (23%)
Similarity:213/510 - (41%) Gaps:100/510 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QWVKI---LLCLILACVN-VFLFVVSWGVDYRILVAREHIRFRQEMPTMDSW--INSPFGKLKNY 63
            :||.:   .|.|:.|.:. |.:.:|...:..::|   :::|......:...|  |..|| .|..|
Mouse     8 RWVALGLGALGLLFAALGVVMILMVPSLIKQQVL---KNVRIDPSSLSFGMWKEIPVPF-YLSVY 68

  Fly    64 VFNVTNAEEFRSGRDSRLKVKEIGPIVYR------IVGFNDILDRNETNVRYRKHRYRVVEFLPE 122
            .|.|.|..|..:|:  :..|:|.||.|||      .:.|||    |:| |.:.::  |.:.|.|:
Mouse    69 FFEVVNPNEVLNGQ--KPVVRERGPYVYREFRQKVNITFND----NDT-VSFVEN--RSLHFQPD 124

  Fly   123 ES--------VAPDVLNWTITSTNNVILG---------AATKVKHTAPLAAFGFDAALMMEDIFV 170
            :|        |.|::|          :||         .:.|:..|..|...|       :..|:
Mouse   125 KSHGSESDYIVLPNIL----------VLGGSILMESKPVSLKLMMTLALVTMG-------QRAFM 172

  Fly   171 TDSVYYFLWEFTRPLLQTLSR----ISNIRPNVAVLYNALKEKEEVYTVNIGPKRGIENFFRIET 231
            ..:|...||.:..|.:..|:.    :..|:....:..........|:||    ..|::||.||..
Mouse   173 NRTVGEILWGYDDPFVHFLNTYLPDMLPIKGKFGLFVGMNNSNSGVFTV----FTGVQNFSRIHL 233

  Fly   232 L---NGEVIIREQLPHTRQYDSNSCPFNVSGALDNSLFPPFVQPDTPLSIVAIESCRVLPLTYQR 293
            :   ||       |.....:.|..|  |:.......::.||:.|::.|...:.|:||.:.|||..
Mouse   234 VDKWNG-------LSKIDYWHSEQC--NMINGTSGQMWAPFMTPESSLEFFSPEACRSMKLTYNE 289

  Fly   294 QERYNGLDTFRYTLLQSHQKPPGCLDTSYGVKLPD---------GMFDVSQCVINDAPSAFSMPH 349
            ...:.|:.|:|:|       .|..|..:..|..|:         |:.:||.|... ||...|.||
Mouse   290 SRVFEGIPTYRFT-------APDTLFANGSVYPPNEGFCPCRESGIQNVSTCRFG-APLFLSHPH 346

  Fly   350 FYGSSYNWSQHYEGYTPNAEDHEPYILLEPVTGIPVTEKYRFQSNIPIPDLRRFSSRLSRFSNMM 414
            ||.:....|:...|..||.::|..::.:.||||||:....:.|.::.|..::.. .:..:...::
Mouse   347 FYNADPVLSEAVLGLNPNPKEHSLFLDIHPVTGIPMNCSVKMQLSLYIKSVKGI-GQTGKIEPVV 410

  Fly   415 IPSFWYEFEMGQLPGFVTSLMWINVNIVQHIQPYCMVLFLVLALWSVLKAIRVAC 469
            :|..|:| :.|.:.|...|..:..:.::..:..|..  :::|.|..:|..:.:.|
Mouse   411 LPLLWFE-QSGAMGGKPLSTFYTQLVLMPQVLHYAQ--YVLLGLGGLLLLVPIIC 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2736NP_611991.1 CD36 10..464 CDD:460076 117/495 (24%)
Scarb1NP_001192012.1 CD36 26..447 CDD:460076 111/475 (23%)

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