DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2736 and scav-4

DIOPT Version :10

Sequence 1:NP_611991.1 Gene:CG2736 / 37998 FlyBaseID:FBgn0035090 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_510157.2 Gene:scav-4 / 181429 WormBaseID:WBGene00008692 Length:560 Species:Caenorhabditis elegans


Alignment Length:564 Identity:117/564 - (20%)
Similarity:205/564 - (36%) Gaps:144/564 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VKILLCLILACVNVFLFVVSWGVDYRI--------LVAREHIRFRQ----EMPT-MDSWINSPFG 58
            :::.:.:|||.  |.|.|.:.|:...|        .:....:..:|    ::|| ...|...|..
 Worm     1 MRLFVAIILAA--VILLVFALGIFLLIPFPIAIFQSIVDSQVYLQQKSDGQLPTGTFYWSKIPAV 63

  Fly    59 KLKNY-VFNVTNAEE--FRSGRDSRLKVKEIGPIVYRIVGFNDILD--RNETNVRYRKHRYRVVE 118
            ::..: :|||||.:|  :.....:.|   ||||..|....|.|...  .|:..:.|..::..|.:
 Worm    64 QIWTFHLFNVTNPDEVLYYGATPNML---EIGPYTYTETEFKDFTQFRDNDNEIFYVNNKTWVYD 125

  Fly   119 FLPEESVAPDVLNWTITSTNNVILGAATK--VKHTAPLAAFGFD--AALMMEDIFVTDSVYYFLW 179
              |..|.....|:.::...|...:.....  .:...|:..||.|  ..|:.|....|.:....|:
 Worm   126 --PTRSCEDCKLSDSVQFANTAYMSTVFMQIYQPAGPIVGFGLDVLTILLGEQPLRTVTAGGTLF 188

  Fly   180 E-FTRPLLQTLSRISNIRPNVAVLYNALKEKEEV-------------------YTVNIGPKRGIE 224
            : :..||:..::     .|.|.||.:.|....::                   ||:..| |...:
 Worm   189 DGYNDPLITLIN-----SPLVKVLLSVLGNPVQLPQVPAAGFFPHYSHTCDGNYTIRTG-KDNTD 247

  Fly   225 NFFRIETLNGEVIIREQLPHTRQYDSNSCPFNVSGALDNSLFPPFVQ-PDTPLSIVAIES--CRV 286
            ...:|:|.||    ...||..:..|::    ::.|..|.::..|.:| .||   :|..:|  ||.
 Worm   248 YVGQIKTWNG----LTHLPWWKTEDTS----DLRGTCDGTIQKPGIQKTDT---VVQFQSFLCRK 301

  Fly   287 LPLTYQRQERYNGLDTFRYTLLQSHQ---KPPG-------------------------------- 316
            ..|.|...:..|.:.|:.:.:.....   |.||                                
 Worm   302 YNLHYHESKTVNSIPTYGFKVEDDSYDAIKNPGYRYENFEKVNYFPNWPCGLNHTKQNNGNCALV 366

  Fly   317 -----------CLDTSY---GVKLPDGMFDVSQCVIND-APSAF----SMPHFYGSSYNWSQHYE 362
                       |.|.|:   ...:|.||.. .:|:... .|:.|    |.|||||:....::...
 Worm   367 DCNQYDNFCNACCDGSHVNGTYVMPPGMVP-QRCLPGQMVPTPFGAILSAPHFYGAPKVVTESMV 430

  Fly   363 GYTPNAEDHEP---YILLEPVTGIPVTEKYRFQSNIPIPDLRRFSS----RLSRFSNMMIPSFWY 420
            |..|:.|.|.|   ||  .|.||..:..::|...:||:     |.|    .:|...|.::|||..
 Worm   431 GIHPDPELHRPGTFYI--NPATGSTIGGEFRMMLSIPV-----FQSLAWTLMSNAPNAIMPSFTL 488

  Fly   421 EFEMGQLPGFVTSLMWINVNIVQHIQ-----PYCMVLFLVLALW 459
            ...: .:..:..:.::.|...:.:|.     .:..|..:.:.||
 Worm   489 TIGV-VMKDYAVNYIYFNTVTIPNIVLGLGIGFTAVSLIAVLLW 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2736NP_611991.1 CD36 10..464 CDD:460076 117/561 (21%)
scav-4NP_510157.2 CD36 14..535 CDD:460076 113/549 (21%)

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