DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tina-1 and Ggact

DIOPT Version :10

Sequence 1:NP_611983.2 Gene:Tina-1 / 37989 FlyBaseID:FBgn0035083 Length:167 Species:Drosophila melanogaster
Sequence 2:XP_006252574.1 Gene:Ggact / 290500 RGDID:1304748 Length:178 Species:Rattus norvegicus


Alignment Length:145 Identity:56/145 - (38%)
Similarity:81/145 - (55%) Gaps:6/145 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KKVSSALSKLFVYGALKYGQPSNSILASSGNGFAKFWCKATTTQKLPLVIATRYNIPFLLNKPGV 69
            |...|.::.:||||.||.|||::.::....:|.|.|..:..|.:..|||||..:|||:||:.||.
  Rat    24 KSACSQMAHIFVYGTLKRGQPNHKVMLDQSHGLATFRGRGCTVESFPLVIAGEHNIPWLLHLPGK 88

  Fly    70 GYYVTGEIYEVDDRMLNSLDNLEDCEEIYTREMHDMNIGVGEG------TVPCWVYLLQKYPENL 128
            |:.|.|||||||::||..||:.|.|..:|.|....:.:...||      :|.|:||....|....
  Rat    89 GHCVAGEIYEVDEQMLRFLDDFEGCPSMYQRTALQVRVLEWEGAGGPGDSVQCFVYSTATYAPEW 153

  Fly   129 LSLRYLSSYENSTTH 143
            |.|.|..:|::...|
  Rat   154 LFLPYHKNYDSEGPH 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tina-1NP_611983.2 GGACT 14..131 CDD:428763 50/122 (41%)
GgactXP_006252574.1 GGACT 33..144 CDD:428763 46/110 (42%)

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