DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tina-1 and ggact.3

DIOPT Version :10

Sequence 1:NP_611983.2 Gene:Tina-1 / 37989 FlyBaseID:FBgn0035083 Length:167 Species:Drosophila melanogaster
Sequence 2:NP_001083029.1 Gene:ggact.3 / 100038780 ZFINID:ZDB-GENE-070424-26 Length:152 Species:Danio rerio


Alignment Length:153 Identity:61/153 - (39%)
Similarity:82/153 - (53%) Gaps:12/153 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LFVYGALKYGQPSNSILASSGNGFAKFWCKATTTQKLPLVIATRYNIPFLLNKPGVGYYVTGEIY 78
            :||||:||.|||::..|.:|.||.|:|...|.|.:..||||||::|||||||.||.|..|:||||
Zfish     6 VFVYGSLKKGQPNHHELLNSNNGQAEFITCAQTKEPYPLVIATKHNIPFLLNVPGSGKQVSGEIY 70

  Fly    79 EVDDRMLNSLDNLEDCEEIYTREMHDMNIGVGEG----TVPCWVYLLQKYPENLLSLRYLSSYEN 139
            .||.:||..||..|.|.:.|.|....:.|..|.|    .....||....:..:.|:.....||:.
Zfish    71 SVDQKMLEFLDWFEKCPDWYQRTSIQLEILKGNGESGRIEEASVYSKINFEPDWLNKPTHESYDT 135

  Fly   140 STTH--PYIMRHRRTHKHPAQDD 160
            :..|  .::.|..|      :||
Zfish   136 NGDHGLKFVCREDR------KDD 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tina-1NP_611983.2 GGACT 14..131 CDD:428763 54/120 (45%)
ggact.3NP_001083029.1 GGACT 6..115 CDD:428763 51/108 (47%)

Return to query results.
Submit another query.