DRSC/TRiP Functional Genomics Resources

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Protein Alignment NaCP60E and CACNA1F

DIOPT Version :10

Sequence 1:NP_001261172.1 Gene:NaCP60E / 37981 FlyBaseID:FBgn0085434 Length:2896 Species:Drosophila melanogaster
Sequence 2:NP_005174.2 Gene:CACNA1F / 778 HGNCID:1393 Length:1977 Species:Homo sapiens


Alignment Length:2940 Identity:574/2940 - (19%)
Similarity:959/2940 - (32%) Gaps:1236/2940 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 KSLFLFYPWSPARRVCVYIATNQFFDYCVMATILFNCIFLAM------------TETVEEAEYIF 156
            ::||.....:|.||.|:.|...:.||..::.||..||:.|.:            ...:|:.||:|
Human    70 RALFCLTLANPLRRSCISIVEWKPFDILILLTIFANCVALGVYIPFPEDDSNTANHNLEQVEYVF 134

  Fly   157 LAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIGMEVG---------------- 205
            |.|:::|.|:||:|.|.:|:...|:||.||.|||:::..|..::.:|.|                
Human   135 LVIFTVETVLKIVAYGLVLHPSAYIRNGWNLLDFIIVVVGLFSVLLEQGPGRPGDAPHTGGKPGG 199

  Fly   206 -NLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFALQVYMGELR 269
             ::..||.|||||.|:.||.:|.|..::|:::.:...|..:..|.:|.::::|:..|::::|.:.
Human   200 FDVKALRAFRVLRPLRLVSGVPSLHIVLNSIMKALVPLLHIALLVLFVIIIYAIIGLELFLGRMH 264

  Fly   270 NKCVRQVPTDWTNVSHTDWQIWVNDTDNWLYDEDELPVLCGNLTGARHCPFEYVCLCVGE--NPN 332
            ..|                  :...:|   .:.:|.|..|.:....|.|..... .|.|.  .||
Human   265 KTC------------------YFLGSD---MEAEEDPSPCASSGSGRACTLNQT-ECRGRWPGPN 307

  Fly   333 HGYTNFDNFMWSMLTTFQLITLDYWENV-YNMVLATCGPMSVSFFTVVVFFGSFYLINLMLAVVA 396
            .|.||||||.::|||.||.:|::.|.:| |.|..|....:...:|..:|.||||:::||:|    
Human   308 GGITNFDNFFFAMLTVFQCVTMEGWTDVLYWMQDAMGYELPWVYFVSLVIFGSFFVLNLVL---- 368

  Fly   397 LSYEEEAEITNEERKKDLLDHRDDSTFSFDPSVLNVKKLNKNNKKKIDSRKGVLLASYSKKKTRR 461
                                                               |||...:||::.:.
Human   369 ---------------------------------------------------GVLSGEFSKEREKA 382

  Fly   462 KKTKGGKEGGTNGNGNGSNGDDNKSHSATPSPGPSPRHSATERPSALTMQAQKQYQQMEQQHK-- 524
            |                :.||                           .|.|::.||||:..:  
Human   383 K----------------ARGD---------------------------FQKQREKQQMEEDLRGY 404

  Fly   525 ---LAKSGSGGSNNPMAPTPKGRISFQDSGMGVKNPNML-YPSDYKGQL--IANSGQPSSNSSGV 583
               :.::......:|.|....|  |..:.|.....|.:. ..:..:|:|  .::|.: |::|:..
Human   405 LDWITQAEELDMEDPSADDNLG--SMAEEGRAGHRPQLAELTNRRRGRLRWFSHSTR-STHSTSS 466

  Fly   584 NRESSQDDSGVV-----DDHEEQDTTNDMGHVSTVELALS----PREVRLIKCNGNIARIKNHNV 639
            :......|:|.:     |:.||:      |.:::....|:    .|..|.::....:.|.:    
Human   467 HASLPASDTGSMTETQGDEDEEE------GALASCTRCLNKIMKTRVCRRLRRANRVLRAR---- 521

  Fly   640 YALHQEFSSEVVVIDDLPDRNCDRCVHWCTDYESWLQFQNCLYKVVRDPLFELAITLCIVLNTAF 704
                                 |.|.|.           .|..|         .|:.|.:.|||..
Human   522 ---------------------CRRAVK-----------SNACY---------WAVLLLVFLNTLT 545

  Fly   705 LAMEHHGMSESFRNALDVGNKVFTSIFTFECIVKLMALSKDFFLCG-WNIFDLLIVTASLLDIIF 768
            :|.||||.........:..|||...:||.|.::||..|....::.. :|.||..:|...:|:.  
Human   546 IASEHHGQPVWLTQIQEYANKVLLCLFTVEMLLKLYGLGPSAYVSSFFNRFDCFVVCGGILET-- 608

  Fly   769 ELVD-------GLSVLRGLRLLRVLKLAQSWTTMKVLLSIIISTIGALGNLTLILVIVIYIFAVI 826
            .||:       |:||||.:||||:.|:.:.|.::..|::.:::::.::.:|.|:|.:.|.||:::
Human   609 TLVEVGAMQPLGISVLRCVRLLRIFKVTRHWASLSNLVASLLNSMKSIASLLLLLFLFIIIFSLL 673

  Fly   827 GMQLFSKDYTPEKFDPDPVPRWNFNDFFHSFMMIFRILCGE-WIEPLWDCMRAEEE---QGASTC 887
            |||||...:   .||.....|..|:.|..:.:.:|:||.|| |...::|.:.|...   .|...|
Human   674 GMQLFGGKF---NFDQTHTKRSTFDTFPQALLTVFQILTGEDWNVVMYDGIMAYGGPFFPGMLVC 735

  Fly   888 FAIFLPTLVMGNFMVLNLFLALLLNSFNSEELKSKKEEVGEESKLARSIERVRDLIRKKRQERKD 952
            . .|:...:.||:::||:|||:.:::..|.:..:.|::.||:|.                     
Human   736 I-YFIILFICGNYILLNVFLAIAVDNLASGDAGTAKDKGGEKSN--------------------- 778

  Fly   953 RKERKFAEKFQQIVLDAQQAHAQTLSHQAAVGLERGDKPGVLAETKFHRLSYQESMNRPVSGSDF 1017
                   ||                                                        
Human   779 -------EK-------------------------------------------------------- 780

  Fly  1018 GFQIPLHDGLHTIVDGLEYDDTGDLPEQIQLQAHPLPPTSDSMPPTYESAMMATTGGSFSSVNGN 1082
                                   |||::                                     
Human   781 -----------------------DLPQE------------------------------------- 785

  Fly  1083 GTCQNLTPFVQAERRLQHQISSGVSTQQYDSREEATYTESIELLGQYNSTDTDPYANDQRSGCGS 1147
              .:.|.|.|:.|                                                    
Human   786 --NEGLVPGVEKE---------------------------------------------------- 796

  Fly  1148 FNRGDSLQDNSSRRYGSEEHDEAFLKYQKSLLTRSPSYRKSLDRLSQSSGQSQRSLLKSEEAEMR 1212
                   ::..:||.|::..:|                                    .||.|  
Human   797 -------EEEGARREGADMEEE------------------------------------EEEEE-- 816

  Fly  1213 RHSSGQSLNSMSIEQDELLSQQGNLREELLNCDQKELFQFLQEEEELQKGTKLRRISNVMRSRRP 1277
                         |::|                        :||||...|.:|            
Human   817 -------------EEEE------------------------EEEEEGAGGVEL------------ 832

  Fly  1278 SSQMGQPENETMVEHSEFDNIIQSFEKELEEIKRSTTSLERKLSNLSEPSPAADEATKAIMEHIA 1342
                                        |:|:                                 
Human   833 ----------------------------LQEV--------------------------------- 836

  Fly  1343 IITGASERSAADEVVLPLNPYDSYDLSSVPRRSQSVSAAAQRQSVKLKRRSLEKQRKIDEDFSIS 1407
                                        ||:                                  
Human   837 ----------------------------VPK---------------------------------- 839

  Fly  1408 NEIRKICDQIHAPFVAMEAMAVAATSASQAQPNQSPFLRRKVDPFTVQFDRFKRLSLIERVEEVP 1472
                                                                      |:|..:|
Human   840 ----------------------------------------------------------EKVVPIP 846

  Fly  1473 EEEKPISTLRIESEKMPRKFLHGPDQLRLDSLSLKSTNSYENLLIQKQKLGMATPPAVPATPPTS 1537
            |...                          ...|..||                           
Human   847 EGSA--------------------------FFCLSQTN--------------------------- 858

  Fly  1538 LKSSIEPPTLAQISSLKTTPPLAALTEHQQHFHATSIQAAPTPAHTHAHSQAHAHSMAGQRRRME 1602
                                                      |.....|:..|.|          
Human   859 ------------------------------------------PLRKGCHTLIHHH---------- 871

  Fly  1603 HPQSTLDKAASFQSARTESHSSGAADASSALALAMAQKTEQSQSTAPDATQKPSAFTRLTEKPWH 1667
                                                                  .||.|      
Human   872 ------------------------------------------------------VFTNL------ 876

  Fly  1668 CLVSYVDDLTVGGRRNSQGAYNDPMTFPSYGATKAAKVPDDCFPQKCYDHFYFRCPWFMSCMDTQ 1732
                                                                             
Human   877 ----------------------------------------------------------------- 876

  Fly  1733 SAKHWTRVRTAVLTVVDTPAFEWFVLVLIFASSITLCFEDINLDKNKTLKRVLYWINFSFCLIFV 1797
                                    :||.|..||::|..|| .:..:.....:|.:.:::|..||.
Human   877 ------------------------ILVFIILSSVSLAAED-PIRAHSFRNHILGYFDYAFTSIFT 916

  Fly  1798 VEMILKWLALGF----SKYFTSFWTILDFIIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAI 1858
            ||::||....|.    ..:..|::.:||.::|.||:.|..|..:. :.|::.||.||.|||||||
Human   917 VEILLKMTVFGAFLHRGSFCRSWFNMLDLLVVSVSLISFGIHSSA-ISVVKILRVLRVLRPLRAI 980

  Fly  1859 SRWQGMRIVVNALMYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKFFKCVNE--------MGELL 1915
            :|.:|::.||..:..||.:|.|:::|..:...:|:.:|||.|.|||:.|.:|        .|..|
Human   981 NRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYTCTDEAKHTPQECKGSFL 1045

  Fly  1916 --PITEVNDKWDCIEQNYTWINSKITFDHVGMGYLALLQVATFEGWMEVMADAVDARGVDLQPQR 1978
              |..:|:..   :.:...|:||...||:|....:||..|:|||||..::..|:||...|..|  
Human  1046 VYPDGDVSRP---LVRERLWVNSDFNFDNVLSAMMALFTVSTFEGWPALLYKAIDAYAEDHGP-- 1105

  Fly  1979 EANLYAY-----IYFVIFIVCGSFFTLNLFIGVIIDNFNML-KKKYEGGVLEMFLTESQK---HY 2034
               :|.|     ::|:::|:..:||.:|:|:|.:|..|... :::|:...|:    ::|:   .|
Human  1106 ---IYNYRVEISVFFIVYIIIIAFFMMNIFVGFVIITFRAQGEQEYQNCELD----KNQRQCVEY 1163

  Fly  2035 YTAMKKLGRKKPQKVIKRPINHFLAMFYDLSNSRRFEIAIFVLIFLNMLTMGIEHYDQPHAVFFI 2099
            ....:.|.|..|    |.|..:   ..:...||..||..:|:||.||.:.:.::||:|.....:.
Human  1164 ALKAQPLRRYIP----KNPHQY---RVWATVNSAAFEYLMFLLILLNTVALAMQHYEQTAPFNYA 1221

  Fly  2100 LEVSNAFFTTVFGLEAIVKIVGLR-YHYFTVPWNVFDFLLVLASIF----------GILMEDIMI 2153
            :::.|..||.:|.:|.::||:..: .||||..||.||.|:|:.||.          |.|.|....
Human  1222 MDILNMVFTGLFTIEMVLKIIAFKPKHYFTDAWNTFDALIVVGSIVDIAVTEVNNGGHLGESSED 1286

  Fly  2154 DLPISPTLLRVVRVFRIGRILRLIKAAKGIRKLLFALVVSLPALFNIGALLGLITFIYAILGMSL 2218
            ...||.|..   |:||:.|:::|:...:|||.||:..:.|..||..:..|:.:|.||||::||.:
Human  1287 SSRISITFF---RLFRVMRLVKLLSKGEGIRTLLWTFIKSFQALPYVALLIAMIFFIYAVIGMQM 1348

  Fly  2219 FGNVKLQGA--LDDMVNFQTFGRSMQLLFRLMTSAGWNDVLESLMIQPPD-CDP---FIHGHTNG 2277
            ||.|.||..  ::...|||||.:::.||||..|...|.:::  |...|.: |||   |..|. ..
Human  1349 FGKVALQDGTQINRNNNFQTFPQAVLLLFRCATGEAWQEIM--LASLPGNRCDPESDFGPGE-EF 1410

  Fly  2278 NCGHPLLAITYFTSFIIISYMIVINMYIAIILENFNQAHQEEEIGIVEDDLEMFYIRWSKYDPHA 2342
            .||.. .||.||.||.::...::||:::|:|::||:...::..| :....|:.|...||:|||.|
Human  1411 TCGSN-FAIAYFISFFMLCAFLIINLFVAVIMDNFDYLTRDWSI-LGPHHLDEFKRIWSEYDPGA 1473

  Fly  2343 TQFIHFSQLSDFIASLDPPLGISK--PNNVA---LVSFNLPISKGNKIHCLDILHALVKHVLGHV 2402
            ...|....:...:..:.||||..|  |:.||   ||:.|:|::....:.....|.|||:..| .:
Human  1474 KGRIKHLDVVALLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVTFNATLFALVRTSL-KI 1537

  Fly  2403 EETDNFKQLQEQMDVKFKKQFPTRKELEIVSSTRIWKRQEK---------------------AAK 2446
            :...|.:|..:::.:..||               ||||.::                     |..
Human  1538 KTEGNLEQANQELRIVIKK---------------IWKRMKQKLLDEVIPPPDEEEVTVGKFYATF 1587

  Fly  2447 TIQTGWKEYLRRKREKERSNSGDSATQTSSPGGWQSKLSALNFFHLQVSRRGTACSSRASSRKSS 2511
            .||..::::.|||.:....|  |:|..|||  ..|:.|.:|.....:: |:...|.:.....:..
Human  1588 LIQDYFRKFRRRKEKGLLGN--DAAPSTSS--ALQAGLRSLQDLGPEM-RQALTCDTEEEEEEGQ 1647

  Fly  2512 RASDASDLSELAGPWLNLPLMLVSGADEVVKDIKQQNDELGKRGS-IFVEAPRASRRRSFYNFFL 2575
            ...:..|..:|.   .|...|:              :....:||| |.|..|...|.....:|..
Human  1648 EGVEEEDEKDLE---TNKATMV--------------SQPSARRGSGISVSLPVGDRLPDSLSFGP 1695

  Fly  2576 RHQDAVDDSLTSPSV-------HRK--TAMNNTTNTTSNSA------------------------ 2607
            ...|....:.:.|||       ||:  .|:..|.....||.                        
Human  1696 SDDDRGTPTSSQPSVPQAGSNTHRRGSGALIFTIPEEGNSQPKGTKGQNKQDEDEEVPDRLSYLD 1760

  Fly  2608 STSGTASSTATAP----------------------ATGCGPAAT--------SASD----SDRHQ 2638
            ..:||...:...|                      ..|..|:.|        |..|    ...|:
Human  1761 EQAGTPPCSVLLPPHRAQRYMDGHLVPRRRLLPPTPAGRKPSFTIQCLQRQGSCEDLPIPGTYHR 1825

  Fly  2639 AVGGGSAPSRKRASSFIRKKPPLERGLSAQSALRVNKNAFVSEASAPEVIVTRPSPEQQTHPHSL 2703
              |..|.|:|.:.|   ...|| :||....:.|     ..|.|.:|.|..:.|.|...:|.    
Human  1826 --GRNSGPNRAQGS---WATPP-QRGRLLYAPL-----LLVEEGAAGEGYLGRSSGPLRTF---- 1875

  Fly  2704 SLRPDNATLVHVLVHRESEEYKEEDESSPSVSGNGNG--------FGVGLDMLSKQPPPQIRITT 2760
                   |.:||          ....|.||....|:.        ...||.:.::.|    |...
Human  1876 -------TCLHV----------PGTHSDPSHGKRGSADSLVEAVLISEGLGLFARDP----RFVA 1919

  Fly  2761 GSVESSMDTCAMPTVQIMVDSPKDPPRGDFSSAPIDDV-GAPIDVNVQGDTSQVFYDYNPEKATD 2824
            .:.:...|.|.:                     .:|:: .|..|:..|| ||.::.|.....:..
Human  1920 LAKQEIADACRL---------------------TLDEMDNAASDLLAQG-TSSLYSDEESILSRF 1962

  Fly  2825 DQGNGQDETAQFESL 2839
            |:.:..||.|...:|
Human  1963 DEEDLGDEMACVHAL 1977

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NaCP60ENP_001261172.1 Ion_trans 125..371 CDD:459842 79/277 (29%)
Ion_trans 687..902 CDD:459842 67/226 (30%)
Ion_trans 1751..2019 CDD:459842 90/287 (31%)
Na_channel_gate 2009..2063 CDD:240441 10/57 (18%)
Ion_trans 2067..2320 CDD:459842 94/269 (35%)
GPHH 2332..2378 CDD:465306 18/50 (36%)
CACNA1FNP_005174.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..60
I 79..375 96/372 (26%)
Ion_trans 91..383 CDD:459842 93/368 (25%)
Binding to the beta subunit. /evidence=ECO:0000250 395..412 4/16 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 418..441 6/24 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 455..488 6/33 (18%)
II 515..761 78/296 (26%)
Ion_trans 532..763 CDD:459842 73/245 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 767..830 26/342 (8%)
III 858..1140 97/519 (19%)
Ion_trans 870..1107 CDD:459842 83/405 (20%)
Dihydropyridine binding. /evidence=ECO:0000250 1060..1150 31/94 (33%)
IV 1177..1444 94/276 (34%)
Ion_trans 1189..1452 CDD:459842 94/269 (35%)
Dihydropyridine binding. /evidence=ECO:0000250 1397..1463 21/68 (31%)
Phenylalkylamine binding. /evidence=ECO:0000250 1409..1452 14/43 (33%)
GPHH 1461..1514 CDD:465306 19/52 (37%)
Ca_chan_IQ 1524..1598 CDD:462591 16/89 (18%)
CAC1F_C 1619..1976 CDD:465298 77/432 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1637..1754 23/133 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1816..1841 7/29 (24%)
Blue background indicates that the domain is not in the aligned region.

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