DRSC/TRiP Functional Genomics Resources

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Protein Alignment NaCP60E and tpcn3

DIOPT Version :10

Sequence 1:NP_001261172.1 Gene:NaCP60E / 37981 FlyBaseID:FBgn0085434 Length:2896 Species:Drosophila melanogaster
Sequence 2:NP_001170916.1 Gene:tpcn3 / 557460 ZFINID:ZDB-GENE-141215-16 Length:773 Species:Danio rerio


Alignment Length:894 Identity:172/894 - (19%)
Similarity:314/894 - (35%) Gaps:347/894 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly  1640 KTEQSQSTAPDATQKPSAFT------------RLTEKPWHCLVSYVDDLTVGGRRNSQGAYNDPM 1692
            |||::..|    ..|...||            ::||| :.....||.|          ..||..:
Zfish     5 KTEKTSHT----LTKDEGFTNGGNHVPSNVTDQMTEK-FDLATVYVSD----------AKYNRNI 54

  Fly  1693 TFPSYGATKAAKVPDDCFPQK-----CYDHFYFRCPWFMSCMDTQSAKHWTRVRTAVLTVVDTPA 1752
            .|             |..||.     .|:|      |||     |:..:...:....|.:.:.||
Zfish    55 FF-------------DTSPQAVKLYLLYNH------WFM-----QTLVYVFIIINLALALFEDPA 95

  Fly  1753 FEWFVLVLIFASSI--TLCFEDINLDKNKTLKRVLYWINFSFCLIFVVEMILKWLALGFSKYFTS 1815
               .|.:.|:|:|.  |:|..                 .|:..:|...::|.|          ..
Zfish    96 ---VVPLPIWATSTIETICLS-----------------AFTVRIIHYAKVIPK----------DK 130

  Fly  1816 FW----TILDFIIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAISRWQG--MRIVVNALMYA 1874
            ||    .|...|||.:|...::|...........:|..|.||||..::..:|  :|....::..|
Zfish   131 FWKDPKNICIIIIVTLSFIDMVIYGALKATGHYGIRWSRVLRPLLLVNVTEGRQLRRAFRSIRNA 195

  Fly  1875 IPSIFNVLLVCLVFWLIFSIMGVQFFGGKFFKCVNEMGELLPITEVNDKWDCIEQNYTWINSKIT 1939
            :|.|..|..:.:...|:||:|.::.||.:....:|                              
Zfish   196 LPQISYVFFLFMFSVLVFSLMALKLFGKRGLLTIN------------------------------ 230

  Fly  1940 FDHVGMGYLALLQVATFEGWMEVMAD----AVDARGVD-LQPQREANLYAYIYFVIFIVCGSFFT 1999
                |..|        |..:|:::.|    ...|...| :.|...:::|..|:|:::||..::..
Zfish   231 ----GSPY--------FTDYMDIVFDLYVLVTTANSPDVMMPAYNSSVYFTIFFILYIVINTYTF 283

  Fly  2000 LNLFIGVIIDNFNMLKKKY----------------------------EGG--------------- 2021
            ::.|:.|:.:|:    |||                            |||               
Zfish   284 MSFFLAVVYNNY----KKYLKEEVRQLVKAKRIKMCRAFSLLQENRGEGGEPVVTQANWNHLVKL 344

  Fly  2022 -------------------------------------VLEMFLTESQKH-YYTAMKKLGRKKPQK 2048
                                                 .:::...:||.| .......|....|.:
Zfish   345 VKPKISTAHRELLWSVLDDQNKGHIGKFAFVQLADLLSIQVITVKSQAHPIQICFPSLYNSLPSR 409

  Fly  2049 VIKRPINHFLAMF-YDLSNSRRFEIAIFVLIFLNMLTMGIEHYDQPHAVFFILEVSNA--FFTTV 2110
            .|::.::|.:.:: |||            :|.:|.:.:|:   |:.:.|     ||||  .|..:
Zfish   410 FIRQMVHHRVFVYAYDL------------IILVNAVFIGL---DEENPV-----VSNAEWGFLAL 454

  Fly  2111 FGLEAIVKIVGLRYHYFTVP---------WNVFDFLLVLASIFGILMEDIMIDLP--ISPTLLRV 2164
            :.||.::|:      |.|.|         ||.||.::|::::||.::...:....  .|..:|.:
Zfish   455 YMLEILLKL------YATEPRAFFARHQFWNWFDTIIVVSALFGTIINSALKHSGGYTSRQVLDI 513

  Fly  2165 VRVFRIGRILRLIKAAKGIRKLLFALVVSLPALFNIGALLGLITFIYAILGMSLF---------- 2219
            |.:.|:.|::|::.:.|..|.::..|:...|.:...|.|:.::.:|:|::||.||          
Zfish   514 VFILRVLRLIRVVDSIKRFRAIINTLIKIGPTILTFGQLILVVYYIFAMVGMELFKGKIQFFEPN 578

  Fly  2220 ---------GNVKLQGALDDMVNFQTFGRSMQLLFRLMTSAGWNDVLES--LMIQPPDCDPFIHG 2273
                     ||..|:......:|:              ....:|||:.|  |:::....:.: |.
Zfish   579 STSPDREYCGNPLLKSTSFAKLNY--------------CKNNFNDVISSFILLLELTVVNQW-HV 628

  Fly  2274 HTNGNCGHPLLAIT------YFTSFIIISYMIVINMYIAIILENF---------------NQAHQ 2317
            .|:|     ..|:|      :|..|.|:..:|:||:::|.|||.|               .:..:
Zfish   629 LTSG-----FTAVTHVSARLFFVIFHIVVVIIIINIFVAFILEAFLVEYTVDKSELQTSLEKKIE 688

  Fly  2318 EEEIGIVEDDLEMFYIRWSKYDPHATQFIHFSQLSDFIASLDPPLGISK 2366
            |.|:.:.:|.::                   :.|.|.:.:.|..||.|:
Zfish   689 ELELNVQQDGVD-------------------TGLVDAMETNDSDLGSSE 718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NaCP60ENP_001261172.1 Ion_trans 125..371 CDD:459842
Ion_trans 687..902 CDD:459842
Ion_trans 1751..2019 CDD:459842 58/308 (19%)
Na_channel_gate 2009..2063 CDD:240441 14/135 (10%)
Ion_trans 2067..2320 CDD:459842 67/307 (22%)
GPHH 2332..2378 CDD:465306 6/35 (17%)
tpcn3NP_001170916.1 Ion_trans 73..295 CDD:459842 58/298 (19%)
Ion_trans 417..>571 CDD:459842 45/179 (25%)
Blue background indicates that the domain is not in the aligned region.

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